Proteomics

Dataset Information

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ShenZhang_DDAnoDE_APMS_P63_6600


ABSTRACT: This dataset consists of 9 raw MS files and associated peak lists and results files, acquired on AB Sciex TripleTOF 6600 mass spectrometer operated in Data Dependent Acquisition mode. Samples were generated by Dushyandi Rajendran and Shen Zhang. Mass spectrometry acquisition was performed by Shen Zhang. Analysis was performed by Brett Larsen, Ji-Young Youn, Anne-Claude Gingras, and Shen Zhang. The files are associated with a manuscript submitted for publication by Shen Zhang et al. The main goal of this paper was to further optimize a no dynamic exclusion (noDE) strategy for analysis of protein-protein interactions. This dataset presents a noDE strategy which identifies more high confidence protein interactors than traditional data-dependent acquisition (DDA) with DE and data-independent acquisition (DIA) approaches. Anne-Claude Gingras is the corresponding author of the manuscript (gingras@lunenfeld.ca); Anne-Claude Gingras should be contacted for questions on this dataset (gingras@lunenfeld.ca)

INSTRUMENT(S): TripleTOF 6600

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

SUBMITTER: Anne-Claude Gingras  

PROVIDER: MSV000088853 | MassIVE | Thu Feb 17 07:59:00 GMT 2022

SECONDARY ACCESSION(S): PXD031743

REPOSITORIES: MassIVE

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