Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

32 Standards mixture_treated with Hydroxilamine

ABSTRACT: Data dependent analysis of a mixture of standard molecules treated with Hydroxylamine

INSTRUMENT(S): impact II

ORGANISM(S): Not Applicable

SUBMITTER: Daniel Petras Chambers Hughes

PROVIDER: MSV000093505 | MassIVE | Mon Nov 27 01:39:00 GMT 2023

REPOSITORIES: MassIVE

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

32 Standards mixture_Not_Treated

Project description:Data dependent analysis of a mixture of standard molecules not treated.

2024-01-04 | MSV000093763 | MassIVE

32 Standards mixture_treated with cys

Project description:Data dependent analysis of a mixture of standard molecules treated with cys

2023-11-27 | MSV000093504 | MassIVE

32 Standards mixture_treated with aqc

Project description:Data dependent analysis of a mixture of standard molecules treated with aqc

2023-11-27 | MSV000093502 | MassIVE

Uni TU_NP_Library_treated with cys

Project description:Data dependent analysis of a mixture of standard molecules treated with cys

2023-11-27 | MSV000093503 | MassIVE

Uni TU_NP_Library_treated with hydroxylamine

Project description:Data dependent analysis of a University of Tuebingen NPs library treated with hydroxylamine

2023-11-27 | MSV000093506 | MassIVE

Absolute Quantification of Yeast Proteins Using Synthetic Peptide Standards and TMT labeling

Project description:The absolute protein amounts for the selected yeast ribosomal proteins (RPs) were determined using the standard peptides and TMT labelling. The range of the standard tryptic peptides were selected and synthesized based on the preliminary data-dependent experiments. The synthetic peptides were mixed and four aliquots containing different amounts of the peptides were labelled each with a different TMT labelling reagent. The yeast cell lysate was digested and labelled in parallel. The labelled cellular and standard samples were combined, and the absolute peptide amounts in the lysate were calculated by comparison to the known amounts in the standard TMT channels.

2020-03-13 | PXD015025 | Pride

Effects of a mixture of amino acids and other small molecules on the gene expression profile of HeLa cells

Project description:Hela cells were treated with a mixture of amino acids and other small molecules, called active mixture for various time periods. The aim was to identify the differentially expressed genes that are upregulated or downregulated upon treatment at different time points.

2018-03-07 | GSE111488 | GEO

Approaching absolute quantification using label-free approaches and external proteins standards in yeast cultures

Project description:Protein extracts of Saccharomyces cerevisiae CEN.PK113-7D cultivated in chemostats under different conditions. Representative samples containing aliquots of all conditions were spiked with UPS2 standard (Sigma) to estimate absolute values in fmol. The conditions for Saccharomyces cerevisiae CEN.PK113-7D are: T2- Standard condition : 30°C, pH 5.5 T3- High temperature: 36°C, pH 5.5 T4- Low pH: 30°C, pH 3.5 T5- Osmotic stress : 30°C, pH 5.5, 1M KCl T6- Anaerobic condition Furthermore, representative samples pooling aliquots of each condition are indicated as "bulk" samples. These samples were spiked with UPS proteins. A validation step was carried out by spiking 4 external proteins at known concentrations within the yeast and UPS proteins mixture

2022-02-15 | PXD014765 | Pride

Reactivity-dependent profiling of RNA 5-methylcytidine dioxygenases [II]

Project description:We adapted the Aldehyde reactive probe (ARP; O-(biotinylcarbazoylmethyl) hydroxylamine) pulldown method to map ALKBH1 dependent targets in a transcriptome-wide manner.

2022-06-28 | GSE202814 | GEO

Efficient removal of TMT-labelling by-products in proteomic samples by methylamine  

Project description:Comparing the performance of methylamine and hydroxylamine on phospho-peptide analysis, particularly in relation to the identification of more complex dose-dependent patterns.

2025-03-17 | PXD056908 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data