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Raw data for LipidIMEA: Integrating Data-Dependent and Data-Independent Acquisition Methods for Comprehensive Lipidomic Profiling Using Ion Mobility Spectrometry-Mass Spectrometry and Streamlined Data Analysis Workflow

ABSTRACT: All lipidomics raw data for: Integrating Data-Dependent and Data-Independent Acquisition Methods for Comprehensive Lipidomic Profiling Using Ion Mobility Spectrometry-Mass Spectrometry and Streamlined Data Analysis Workflow. This includes collection of iterative DDA LC-QTOF MS/MS data and DIA LC-IMS-MS/MS data from Agilent 6560 drift tube IMS platform, and DDA LC-MS/MS data from Orbitrap Lumos platform. Samples include lipid extracts from a set of Comparative Reference (CompRef) materials of protemomics and metabolomics studies by by the Clinical Proteomic Tumor Analysis Consortium, which were patient-derived xenograft (PDX) tumor samples from established basal and luminal breast cancer intrinsic subtypes that were grown in mice. NIST SRM 1950 plasma was also included as a QC sample for test and method optimization.

INSTRUMENT(S): 6560 Q-TOF LC/MS, Orbitrap Fusion Lumos

ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090)

SUBMITTER: Xueyun Zheng

PROVIDER: MSV000098703 | MassIVE | Fri Aug 01 11:45:00 BST 2025

REPOSITORIES: MassIVE

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