Dataset Information

3D'omics: Histomonas challenge turkey trial & Histomonas challenge chicken trial

ABSTRACT:

Bioproject PRJEB86259 https://www.ebi.ac.uk/ena/browser/view/PRJEB86259 Histomonas challenge turkey trial

Bioproject PRJEB86260 https://www.ebi.ac.uk/ena/browser/view/PRJEB86260 Histomonas challenge chicken trial

INSTRUMENT(S): Liquid Chromatography MS - negative - reverse-phase, Liquid Chromatography MS - positive - hilic, Liquid Chromatography MS - positive - reverse-phase, Liquid Chromatography MS - negative - hilic

PROVIDER: MTBLS13488 | MetaboLights | 2025-12-19

REPOSITORIES: MetaboLights

ACCESS DATA

Dataset's files

Source:

			Action	DRS
	a_MTBLS13488_LC-MS_negative_hilic_metabolite_profiling.txt	Txt
	a_MTBLS13488_LC-MS_negative_reverse-phase_metabolite_profiling.txt	Txt
	a_MTBLS13488_LC-MS_positive_hilic_metabolite_profiling.txt	Txt
	a_MTBLS13488_LC-MS_positive_reverse-phase_metabolite_profiling.txt	Txt
	i_Investigation.txt	Txt

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Project description:Testing the effect of seaweed as a novel cost-efficient feed source for Atlantic salmon feed. Fermentation of novel raw materials for fish feed is a new practice with little prior experience of direct relevance to aquaculture and fish farming. In Trial D, an alternative marine compound is included in the feed, which is based on seaweed. HoloFood Trial D - fermented seaweed open water-dose response is reported in the current study <a href='https://www.ebi.ac.uk/metabolights/MTBLS6733' rel='noopener noreferrer' target='_blank'>MTBLS6733</a>.HoloFood Trial A - seaweed-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS4381' rel='noopener noreferrer' target='_blank'>MTBLS4381</a>.HoloFood Trial B - blue mussel-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS4382' rel='noopener noreferrer' target='_blank'>MTBLS4382</a>.HoloFood Trial C - blue mussel ensilage-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS4384' rel='noopener noreferrer' target='_blank'>MTBLS4384</a>.HoloFood Trial 1/2/3 is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS6988' rel='noopener noreferrer' target='_blank'>MTBLS6988</a>. Linked cross omic data sets:Nucleic acid data associated with this study are available in the European Nucleotide Archive (ENA): accession number <a href='https://www.ebi.ac.uk/ena/browser/view/PRJEB43192' rel='noopener noreferrer' target='_blank'>PRJEB43192</a>.Metagenomic data associated with this study are available from MGnify under the Super Study '<a href='https://www.ebi.ac.uk/metagenomics/super-studies/holofood' rel='noopener noreferrer' target='_blank'>holofood</a>'.

Project description:Testing the effect of blue mussel ensilage as a novel cost-efficient protein feed source for Atlantic salmon feed. Fermentation of novel raw materials for fish feed is a new practice with little prior experience of direct relevance to aquaculture and fish farming. In Trial A, an alternative marine compound is included in the feed, which is based on seaweed. In the trial were multiple inclusion levels used to investigate the effect of seaweed inclusion in an aquaculture setting. HoloFood Trial A - seaweed-dose response is reported in the current study <a href='https://www.ebi.ac.uk/metabolights/MTBLS4381' rel='noopener noreferrer' target='_blank'>MTBLS4381</a>.HoloFood Trial B - blue mussel-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS4382' rel='noopener noreferrer' target='_blank'>MTBLS4382</a>.HoloFood Trial C - blue mussel ensilage-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS4384' rel='noopener noreferrer' target='_blank'>MTBLS4384</a>.HoloFood Trial D - fermented seaweed open water-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS6733' rel='noopener noreferrer' target='_blank'>MTBLS6733</a>.HoloFood Trial 1/2/3 is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS6988' rel='noopener noreferrer' target='_blank'>MTBLS6988</a>. Linked cross omic data sets:Nucleic acid data associated with this study are available in the European Nucleotide Archive (ENA): accession number <a href='https://www.ebi.ac.uk/ena/browser/view/PRJEB43192' rel='noopener noreferrer' target='_blank'>PRJEB43192</a>.Metagenomic data associated with this study are available from MGnify under the Super Study '<a href='https://www.ebi.ac.uk/metagenomics/super-studies/holofood' rel='noopener noreferrer' target='_blank'>holofood</a>'.

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Project description:Chicken farming is critical for future food security, yet there is still a need for improving animal welfare and optimised feeding strategies. HoloFood will explore the interaction and impact of the microbiome together with the host (animal) in response to different feeding strategies already implemented commercially. Chicken farming has recently made huge efforts towards healthy, natural food production without using chemicals or antibiotics in food systems. As such natural alternatives, such as prebiotic and probiotic additives to chicken feed, have been a huge improvement. Nonetheless, the full impact of these natural alternatives and the variation in chicken growth is still poorly understood. HoloFood aims to investigate the effect and interplay between the host (chicken) - microbiome in response to different dietary additives. HoloFood Trial 1/2/3 is reported in the current study <a href='https://www.ebi.ac.uk/metabolights/MTBLS6988' rel='noopener noreferrer' target='_blank'>MTBLS6988</a>.HoloFood Trial A - seaweed-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS4381' rel='noopener noreferrer' target='_blank'>MTBLS4381</a>.HoloFood Trial B - blue mussel-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS4382' rel='noopener noreferrer' target='_blank'>MTBLS4382</a>.HoloFood Trial C - blue mussel ensilage-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS4384' rel='noopener noreferrer' target='_blank'>MTBLS4384</a>.HoloFood Trial D - fermented seaweed open water-dose response is reported in <a href='https://www.ebi.ac.uk/metabolights/MTBLS6733' rel='noopener noreferrer' target='_blank'>MTBLS6733</a>. Linked cross omic data sets:Nucleic acid data associated with this study are available in the European Nucleotide Archive (ENA): accession number <a href='https://www.ebi.ac.uk/ena/browser/view/PRJEB43192' rel='noopener noreferrer' target='_blank'>PRJEB43192</a>.Metagenomic data associated with this study are available from MGnify under the Super Study '<a href='https://www.ebi.ac.uk/metagenomics/super-studies/holofood' rel='noopener noreferrer' target='_blank'>holofood</a>'.

Dataset Information

3D'omics: Histomonas challenge turkey trial & Histomonas challenge chicken trial

Dataset's files

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