Metabolomics

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Cardiac untargeted lipidomics in cardiomyocyte-specific SREBP1 knockdown mice


ABSTRACT:

Background: Heart failure with reduced ejection fraction (HFrEF) is characterized by impaired contractility and high mortality. Dysregulation of intracellular ion cycling underlies the decline in cardiac contractility. Modulation of cardiac Na+/H+ and Ca2+ handling is considered a valuable approach for restoring cardiac function; thus, an in-depth understanding of the molecular regulation is timely for the discovery of new strategies to treat HFrEF.

Methods: Cardiac tissues from HFrEF patients and mice subjected to transverse aortic constriction (TAC) were analyzed for sterol regulatory element-binding protein 1 (SREBP1)  transactivation of Sodium-hydrogen exchanger 3 (NHE3).Cardiomyocyte-specific SREBP1 transgenic (Srebp1a-Tg) and knockdown (Cre-Srebp1f/f) mice were generated. AAV9 vectors carrying Slc9a3 (encoding NHE3), Srebf1 or shRNA against Slc9a3, driven by the cardiomyocyte-specific cTnT promoter, were used to validate the role of the SREBP1-NHE3 in HFrEF. 

Results: SREBP1 was activated in human hearts with HFrEF (dilated cardiomyopathy without diabetes or hyperlipidemia) and in mouse hearts with TAC-induced HFrEF. Srebp1a-Tg mice exhibited impaired cardiac contractilitywith dysregulated calcium handling in cardiomyocytes without apparent lipid accumulation. Transcriptomics analysis, ChIP-seq, ChIP assay, and promoter activity assessment showed that Slc9a3 (encoding NHE3) is a transcriptional target of SREBP1. Consistently, NHE3 was upregulated in Srebp1a-Tg mouse hearts, hearts under TAC surgery, and human failing hearts. Cardiomyocyte-specific knockdown of Srebp1 or Slc9a3 restored calcium handling and improved cardiac function in TAC hearts. In Srebp1a-Tg mice, NHE3 knockdown alleviated Na+ and Ca2+ overload and rescued cardiac systolic dysfunction. Conversely, NHE3 overexpression caused contractile impairment in both Cre-Srebp1f/f mice and controls, which offset the protective effect due to SREBP1 loss in the context of Na+ and Ca2+ overload. These resultsdemonstrate that SREBP1 upregulation of NHE3 caused cardiac dysfunction. Notably, empagliflozin downregulated NHE3 via AMP-activated protein kinase activation and inhibition of SREBP1, which ameliorated calcium overload and restored cardiac systolic function.

Conclusions: SREBP1 transactivates cardiac NHE3 expression during the progression of HFrEF, leading to dysregulatedcalcium handling and impaired contractility, suggesting a non-canonical role of SREBP1 in heart failure. Empagliflozin mitigates these detrimental effects by inhibiting the cardiac SREBP1-NHE3 axis, thus revealing a new pharmacological mechanism by which SGLT2i alleviates HF.

INSTRUMENT(S): Liquid Chromatography MS - alternating - hilic, Liquid Chromatography MS - positive

PROVIDER: MTBLS13696 | MetaboLights | 2026-02-20

REPOSITORIES: MetaboLights

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