Metabolomics

Dataset Information

0

Spatiotemporal determination of metabolite activities in the corneal epithelium on a chip


ABSTRACT: The corneal epithelial barrier maintains the metabolic activities of the ocular surface by regulating membrane transporters and metabolic enzymes responsible for the homeostasis of the eye as well as the pharmacokinetic behavior of drugs. Despite its importance, no established biomimetic in vitro methods are available to perform the spatiotemporal investigation of metabolism and determine the transportation of endogenous and exogenous molecules across the corneal epithelium barrier. This study introduces multiple corneal epitheliums on a chip namely, Corneal Epithelium on a Chip (CEpOC), which enables the spatiotemporal collection as well as analysis of micro-scaled extracellular metabolites from both the apical and basolateral sides of the barriers. Longitudinal samples collected during 48 h period were analyzed using untargeted liquid chromatography-mass spectrometry metabolomics method, and 104 metabolites were annotated. We observed the spatiotemporal secretion of biologically relevant metabolites (i.e., antioxidant, glutathione and uric acid) as well as the depletion of essential nutrients such as amino acids and vitamins mimicking the in vivo molecules trafficking across the human corneal epithelium. Through the shifts of extracellular metabolites and quantitative analysis of mRNA associated with transporters, we were able to investigate the secretion and transportation activities across the polarized barrier in a correlation with the expression of corneal transporters. Thus, CEpOC can provide a non-invasive, simple, yet effectively informative method to determine pharmacokinetics and pharmacodynamics as well as to discover novel biomarkers for drug toxicological and safety tests as advanced experimental model of the human corneal epithelium.

INSTRUMENT(S): Liquid Chromatography MS - positive - hilic

SUBMITTER: Romanas Chaleckis 

PROVIDER: MTBLS2274 | MetaboLights | 2021-07-13

REPOSITORIES: MetaboLights

altmetric image

Publications

Spatiotemporal determination of metabolite activities in the corneal epithelium on a chip.

Abdalkader Rodi R   Chaleckis Romanas R   Wheelock Craig E CE   Kamei Ken-Ichiro KI  

Experimental eye research 20210605


The corneal epithelial barrier maintains the metabolic activities of the ocular surface by regulating membrane transporters and metabolic enzymes responsible for the homeostasis of the eye as well as the pharmacokinetic behavior of drugs. Despite its importance, no established biomimetic in vitro methods are available to perform the spatiotemporal investigation of metabolism and determine the transportation of endogenous and exogenous molecules across the corneal epithelium barrier. This study i  ...[more]

Similar Datasets

2016-03-23 | GSE77403 | GEO
2013-09-01 | E-GEOD-47838 | biostudies-arrayexpress
2013-01-01 | GSE39629 | GEO
2016-03-23 | E-GEOD-77403 | biostudies-arrayexpress
2013-09-01 | E-GEOD-47839 | biostudies-arrayexpress
2024-03-12 | GSE183702 | GEO
2013-01-01 | E-GEOD-39629 | biostudies-arrayexpress
| PRJNA147245 | ENA
2019-11-21 | GSE133903 | GEO
2024-03-19 | GSE260592 | GEO