Metabolomics

Dataset Information

0

Comparison analysis of metabolite profiling in seeds and bark of Ulmus parvifolia, a Chinese medicine species


ABSTRACT:

Ulmus parvifolia (U. parvifolia) was traditionally used in the treatment of some diseases such as inflammation, diarrhea and fevers. With the wide application of molecular biotechnology in plant development and utilization, the pharmaceutical value and chemical composition of the bark and leaves of U. parvifolia had been studied. However, metabolic signatures of seeds have not been studied. Seeds and bark of U. parvifolia were collected at the seeds ripening stage and metabolite profiling was performed through the untargeted metabolomics approach. A total of 2,578 and 2,207 metabolites were identified in seeds and bark, respectively. In particular, 574 differential metabolites were identified from the two parts of U. parvifolia, including flavonoids, terpene glycosides, triterpenoids and sesquiterpenoids. There are some bioactive compounds with antioxidant, anti-inflammatory and anti-cancer activities in these metabolites. More metabolites belonged to flavonoids and sesquiterpenoids were up-regulated in seeds than that in bark. There were more varieties of terpene glycosides and triterpenoids in bark than seeds. The pathway enrichment was performed, while flavonoid biosynthesis and flavone and flavonol biosynthesis were worthy of attention. Metabolic signatures of U. parvifolia seeds and bark were analyzed by untargeted metabolomics approach. Metabolite profiling, characteristics of differential metabolites and pathway enrichment were performed to evaluate the pharmaceutical value of seeds and bark. This study provided a scientific basis for the complementary use of the two different parts of U. parvifolia as a Chinese medicinal material.

INSTRUMENT(S): Liquid Chromatography MS - negative - reverse phase, Liquid Chromatography MS - positive - reverse phase

SUBMITTER: Minglong Yin 

PROVIDER: MTBLS4572 | MetaboLights | 2024-01-09

REPOSITORIES: MetaboLights

altmetric image

Publications

Comparison analysis of metabolite profiling in seeds and bark of <i>Ulmus parvifolia</i>, a Chinese medicine species.

Yin MingLong M   Li ChuanRong C   Wang YuShan Y   Fu JunHui J   Sun YangYang Y   Zhang Qian Q  

Plant signaling & behavior 20221201 1


<i>Ulmus parvifolia</i> (<i>U. parvifolia</i>) is a Chinese medicine plant whose bark and leaves are used in the treatment of some diseases such as inflammation, diarrhea and fever. However, metabolic signatures of seeds have not been studied. The seeds and bark of <i>U. parvifolia</i> collected at the seed ripening stage were used for metabolite profiling analysis through the untargeted metabolomics approach. A total of 2,578 and 2,207 metabolites, while 503 and 132 unique metabolites were iden  ...[more]

Similar Datasets

2022-07-29 | MSV000090015 | MassIVE
2017-08-01 | MTBLS494 | MetaboLights
2007-12-20 | GSE9365 | GEO
2019-03-19 | MTBLS797 | MetaboLights
2008-06-16 | E-GEOD-9365 | biostudies-arrayexpress
2022-10-19 | GSE184872 | GEO
2022-10-19 | GSE184873 | GEO
2014-05-17 | GSE57762 | GEO
2014-05-17 | GSE57755 | GEO
2023-10-06 | PXD044874 | Pride