PAMP-triggered changes in the exometabolome of Arabidopsis suspension cells

ABSTRACT: The goal of this study was to determine how the exometabolome of defense-elicited Arabidopsis suspension cells inhibits virulence gene expression and growth of a plant pathogenic bacterium Pseudomonas syringae. Arabidopsis T87 suspension cells were treated with the pathogen-associated molecular pattern elf26 or a DMSO-control treatment for six hours, then incubated in fresh media for one hour. The conditioned medium (exudate) was collected from each culture by centrifugation and 0.22 um filter to remove plant cells. These samples are designated T=6 mock and T=6 elf26 in our experimental design. We also prepared samples in the same manner from control-treated cells except without any pre-treatment time prior to one hour exudate production. These samples are labeled T=0 mock. A total of seven biological replicates of each treatment condition were analyzed, with each replicate prepared from cells grown in separate flasks. The exudates were prepared in four independent experiments performed on separate days (1 biological replicate from first experiment, 2 biological replicates from each of the 3 remaining experiments). Four samples of the culture medium, one from each of the four independent experiments, are included.

ORGANISM(S): Arabidopsis Thaliana

TISSUE(S): Cultured Cells

DISEASE(S): Bacterial Infection

SUBMITTER: Jeff Anderson  

PROVIDER: ST001034 | MetabolomicsWorkbench | Thu Aug 09 00:00:00 BST 2018

REPOSITORIES: MetabolomicsWorkbench