Genomics

Dataset Information

235

Calophyllum inophyllum


ABSTRACT: Calophyllum inophyllum Transcriptome or Gene expression

ORGANISM(S): Calophyllum inophyllum  

PROVIDER: PRJDA67327 | ENA |

REPOSITORIES: ENA

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Publications

Microsatellite markers derived from Calophyllum inophyllum (Clusiaceae) expressed sequence tags.

Setsuko Suzuki S   Uchiyama Kentaro K   Sugai Kyoko K   Hanaoka So S   Yoshimaru Hiroshi H  

American journal of botany 20111227 1


PREMISE OF THE STUDY: Robust markers are required (inter alia) for assessing origins of Calophyllum inophyllum populations on the Bonin Islands, Japan. Therefore, informative expressed sequence tag (EST)-based microsatellite or simple sequence repeat (SSRs) markers in the species were sought. METHODS AND RESULTS: Using 135378 ESTs derived from de novo pyrosequencing, primers for 475 EST-SSRs were developed, 48 of which were tested for PCR amplification. Thirty-six of the 48 primers showed clear  ...[more]

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