Genomics

Dataset Information

2

Fragaria nipponica


ABSTRACT: Fragaria nipponica: FNI_r1.1 (Strawberry whole-genome sequencing)

ORGANISM(S): Fragaria nipponica  

PROVIDER: PRJDB1479 | ENA |

REPOSITORIES: ENA

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Publications


Cultivated strawberry (Fragaria x ananassa) is octoploid and shows allogamous behaviour. The present study aims at dissecting this octoploid genome through comparison with its wild relatives, F. iinumae, F. nipponica, F. nubicola, and F. orientalis by de novo whole-genome sequencing on an Illumina and Roche 454 platforms. The total length of the assembled Illumina genome sequences obtained was 698 Mb for F. x ananassa, and ∼200 Mb each for the four wild species. Subsequently, a virtual reference  ...[more]

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