Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-Seq study of 3-days larva and pupa in Lysiphlebia japonica

ABSTRACT: RNA-Seq study of 3-days larva and pupa in Lysiphlebia japonica

PROVIDER: PRJEB17745 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

RNA-Seq study of 3-days larva and pupa in Lysiphlebia japonica

Project description:Parasitoids were considered to have the ability to synthesize the lipid. The cotton aphids were parasitized by Lysiphlebia japonica, and Lysiphlebia japonica obtained lipids from cotton aphids. In our study, we get the 3 days larva and pupa from cotton aphids and analysis the expression of the genes involved in the lipid related pathway of these two developmental stages.

2018-10-10 | E-MTAB-5227 | biostudies-arrayexpress

RNA-Seq and UHPLC-Q-TOF/MS Based Lipidomics Study in Lysiphlebia japonica

Project description:Lipids play an important role in energy storage, membrane structure stabilization and signaling. Parasitoids are excellent models to study lipidomics because a majority of them do not accumulate during their free-living life-stage. Studies on parasitoids have mostly focused on the changes in the lipids and gene transcripts in hosts and little attention has been devoted to lipidomics and transcriptomics changes in parasitoids. In this study, a relative quantitative analysis of lipids and their gene transcripts in 3-days-old Lysiphlebia japonica larva (3 days after spawning) and pupae were performed using liquid chromatography, mass spectrometry and RNA-seq. Thirty-three glycerolipids and 250 glycerophospholipids were identified in this study; all triglycerides and the vast majority of phospholipids accumulated in the pupal stage. This was accompanied by differentially regulated lipid uptake and remolding. Furthermore, our data showed that gene transcription was up-regulated in key nutrient metabolic pathways involved in lipid synthesis in 3-days-old larvae. Finally, our data suggests that larva and pupa of L. japonica may lack the ability for fatty acids synthesis. A comprehensive, quantitative, and expandable resource was provided for further studies of metabolic regulation and molecular mechanisms underlying parasitic response to hosts defense.

2021-10-06 | MTBLS409 | MetaboLights

The insect midgut is not restful during the larva-to-larva molting stage

Project description:IMolting, a special period during which the old cuticle is shed and a new one is produced, is crucial to insect development. During their life cycles, insects that undergo complete metamorphosis may experience several larva-to-larva moltings to become larger, followed by larva-to-pupa and pupa-to-adult moltings to become adults. During the larva-to-larva molting stage, insect larvae stop consuming food and become restful. Whether any changes occur within the molting midgut before ecdysis remains known.

2016-02-01 | GSE65522 | GEO

RNA-Seq study of lipid regulation in Aphis gossypii parasitized by Lysiphlebia japonica

Project description:Parasitoids were considered to have the ability to synthesize the lipid. The cotton aphids were parasitized by Lysiphlebia japonica, and Lysiphlebia japonica obtained lipids from cotton aphids. In our study,we get the 3 days parasitized aphids and unparasitized aphids and analysis the expression of the genes involved in the lipid related pathway.

2018-10-10 | E-MTAB-5228 | biostudies-arrayexpress

silkworm temporal expression profiles

Project description:comparison among egg, larva, pupa, and adult stages Egg vs larva, larva vs pupa, and pupa vs adult

2010-10-12 | E-GEOD-24611 | biostudies-arrayexpress

silkworm temporal expression profiles

Project description:comparison among egg, larva, pupa, and adult stages

2010-10-12 | GSE24611 | GEO

Expression of 50-500nt ncRNAs in silkworm Bombyx mori during development

Project description:With an experimental RNomics, we identified 194 novel ncRNAs in silkworm through four developmental stages (egg, larva, pupa and adult). Oligos of 132 ncRNAs were sucessfully designed, the expression of these ncRNAs were analyzed by dual-channel microarray, results showed that 36 ncRNAs had significantly differential expression during development. The RNA from four samples (egg, larva, pupa and adult) were analyzed, the sample of larva was used as reference.

2010-12-22 | E-GEOD-22911 | biostudies-arrayexpress

Expression of 50-500nt ncRNAs in silkworm Bombyx mori during two developmental transitions

Project description:We have performed the first systematic identification and analysis of intermediate size ncRNAs (50-500 nt) in the silkworm genome. We identified 194 novel ncRNAs, the expression profiles of them during the transitions from the egg to the first instar larva and from the fifth instar larva to the pupa were anlyzed by dual-channel microarray. Results showed that 12 ncRNAs had significantly differential expression during the two developmental transitions. The first instar larva sample was used for comparison to the sample of embryo, the fifth instar larva sample was used for comparison to the sample of pupa, respectively.

2010-12-22 | E-GEOD-22912 | biostudies-arrayexpress

single cell RNA-Seq of Dugesia japonica

Project description:A single cell RNA-Seq analysis of Dugesia japonica intact animals by TAS-Seq (Shichino et al, 2022)

2023-09-30 | GSE223927 | GEO

RNA-seq analysis of gene expression associated to altered gene dosage of DeIF6 during eye development in Drosophila melanogaster

Project description:We investigated the transcriptome of the eye imaginal discs and retinae in wild type (GMR/+) and DeIF6 overexpressing (GMR>DeIF6) flies at the third instar larva stage and pupa 40 hours after puparium formation.

2019-07-18 | E-MTAB-5954 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data