Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA sequencing of T. brucei EATRO1125 expressing RBP10

ABSTRACT: RNA sequencing of T. brucei EATRO1125 expressing RBP10

PROVIDER: PRJEB20100 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

RNA sequencing of T. brucei EATRO1125 expressing RBP10

Project description:RBP10 was induced for 24 or 48 hours in procyclic cells derived from EATRO1125; this primes the procyclic cells to differentiate to bloodstream form. RNA-seq was performed to quantify mRNAs changes during the differentiation triggered by RBP10 overexpression.

2017-08-07 | E-MTAB-5602 | biostudies-arrayexpress

Function of Trypanosome brucei RBP10

Project description:Function of Trypanosome brucei RBP10

| PRJEB13058 | ENA

RNAseq of Trypanosoma brucei brucei EATRO1125 bloodstream forms without EIF4E2 compared with add-back

Project description:RNAseq of Trypanosoma brucei brucei EATRO1125 bloodstream forms without EIF4E2 compared with add-back

2021-08-31 | E-MTAB-10719 | biostudies-arrayexpress

Transcriptome sequencing of bloodstream form Trypanosoma brucei expressing VSG121

Project description:Transcriptome sequencing of bloodstream form Trypanosoma brucei expressing VSG121

| PRJEB19301 | ENA

Function of Trypanosome brucei RBP10

Project description:RBP10 RNAi, ectopic expression or RBP10-myc and RNA IP using TAP-RBP10

2016-06-27 | E-MTAB-4564 | biostudies-arrayexpress

In vivo RNA interference RNAi target sequencing of Trypanosoma brucei

Project description:A direct comparison of RNAi in vitro with RNAi in vivo is being performed using RNA interference (RNAi) target sequencing (RIT-Seq) of Trypanosoma brucei to identify all genes specifically required for growth in vivo (the infectome). Assembly of the bloodstream-form T. brucei RNAi library and the RNAi target sequencing (RIT-seq) approach in African trypanosomes were reported previously in Alsford, S. et al. High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome. Genome Res 21, 915-924, 264 doi:gr.115089.110 [pii] 265 10.1101/gr.115089.110 (2011) and Alsford,S et al. High-throughput decoding of antitrypanosomal drug efficacy and resistance. Nature 482, 232236 doi:10.1038/nature10771 (2012). This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/

2014-01-21 | E-ERAD-110 | biostudies-arrayexpress

Expression of the RNA recognition motif protein RBP10 promotes a bloodstream-form transcript pattern in Trypanosoma brucei

2012-02-11 | GSE29176 | GEO

Trypanosoma brucei

Project description:Expression of the RNA recognition motif protein RBP10 promotes a bloodstream-form transcript pattern in Trypanosoma brucei

| PRJNA139983 | ENA

Single-cell RNA sequencing in Trypanosoma brucei

Project description:Single-cell RNA sequencing in Trypanosoma brucei

| PRJNA495370 | ENA

Expression of the RNA recognition motif protein RBP10 promotes a bloodstream-form transcript pattern in Trypanosoma brucei

Project description:In this study we investigate the function of RBP10, and present evidence that the presence of RBP10 is sufficient to induce the expression of mRNAs involved in bloodstream-form energy metabolism. for BS RBP10 RNAi Samples: total of 6 slides, including 3 biological replicates and dyeswap for RBP10 overexpression Samples: total of 5 slides, including 3 biological replicates and dyeswap

2012-02-11 | E-GEOD-29176 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data