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Gene expression ATLAS of Arabidopsis thaliana (accession Columbia) across its lifecycle

ABSTRACT: Gene expression ATLAS of Arabidopsis thaliana (accession Columbia) across its lifecycle

PROVIDER: PRJEB24664 | ENA |

REPOSITORIES: ENA

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Gene expression ATLAS of Arabidopsis thaliana (accession Columbia) across its lifecycle

Project description:Arabidopsis thaliana (accession- Columbia) is an important model plant. RNA-Seq based study of 36 libraries was carried out to explore transcriptional programs operating in different plant parts (seedling, rosette, root, inflorescence, flower, fruit silique, and seed) and developmental stages (2-leaf stage, 6-leaf stage, 12-leaf stage, senescence stage, dry mature and imbibed seed stage). For each tissue type and developmental stage, three individual plants were used as biological replicates.

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Transcriptome analysis of Arabidopsis thaliana roots in response to high nickel

Project description:To gain further insights into a larger number of processes potentially altered by high nickel (Ni), we performed a transcriptional profiling of whole roots of Arabidopsis thaliana accession Columbia-0 (Col-0) exposed to 100 µM nickel, a concentration that induces slight chlorosis and intermediate inhibition of root and shoot growth.

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