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CAGE experiment of S. Cerevisiae strain CEN.PK113-7D in four different chemostat conditions

ABSTRACT: CAGE experiment of S. Cerevisiae strain CEN.PK113-7D in four different chemostat conditions

PROVIDER: PRJEB25845 | ENA |

REPOSITORIES: ENA

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CAGE experiment of S. Cerevisiae strain CEN.PK113-7D in four different chemostat conditions

Project description:The CAGE experiment was performed in four different chemostat conditions to assess if and how much the Transcription start site landscape changes in the industrial relevant S. Cerevisiae strain CEN.PK113-7D in different conditions. CAGE was also used to obtain accurate TSS annotations for each expressed gene.

2019-01-03 | E-MTAB-6650 | biostudies-arrayexpress

RNA sequencing experiment of S. Cerevisiae strain CEN.PK113-7D in four different chemostat conditions

Project description:The RNA sequencing experiment was performed in four different chemostat conditions as control for a CAGE sequencing experiment performed in the same conditions using the industrial relevant S. Cerevisiae strain CEN.PK113-7D

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RNA sequencing experiment of S. Cerevisiae strain CEN.PK113-7D in four different chemostat conditions

Project description:RNA sequencing experiment of S. Cerevisiae strain CEN.PK113-7D in four different chemostat conditions

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Relative quantification from chemostats cultures of Saccharomyces cerevisiae CEN.PK113-7D, Kluyveromyces marxianus CBS 6556 and Yarrowia lipolytica W29

Project description:Relative quantification of protein abundances of three yeast strains (Saccharomyces cerevisiae CEN.PK113-7D, Kluyveromyces marxianus CBS6556 and Yarrowia lipolytica W29) cultivate in chemostats under different conditions. The conditions for Saccharomyces cerevisiae CEN.PK113-7D are: - Standard condition – 30°C, pH 5.5 - High temperature - 36°C, pH 5.5 - Low pH - 30°C, pH 3.5 - Osmotic stress – 30°C, pH 5.5, 1M KCl The conditions for Kluyveromyces marxianus CBS6556 are: - Standard condition – 30°C, pH 5.5 - High temperature - 40°C, pH 5.5 - Low pH - 30°C, pH 3.5 - Osmotic stress – 30°C, pH 5.5, 0.6 M KCl The conditions for Yarrowia lipolytica W29 are: - Standard condition - 28°C, pH 5.5 - High temperature - 32°C, pH 5.5 - Low pH - 28°C, pH 3.5 This study is part of the OMICS data generation of CHASSY project (European Union’s Horizon 2020 grant agreement No 720824).

2019-11-11 | PXD011426 | Pride

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