Project description:A microarray analysis was conducted to investigate transcriptional differences between strains of Paxillus involutus that show different abilities in formation of ectomycorrhizal associations with birch (Betula pendula). Our goal was to identify genes that showed differential regulation from comparing incompatible (not mycorrhiza forming) (Nau) and compatible (mycorrhiza forming) strains (ATCC200175 and Maj) of P. involutus, in association with birch. The entire design involved 11 slides (ME01-M11), 13 labelled extracts, and 3 biological replicates (Rep1-Rep3). The experiment was designed as a simple loop (all-pairwise comparisons) of all three strains including dye-swap, biological and technical replication. Additional information: In our pre-processing of data, 4 channels were excluded for further analyses due to overall poor quality and are listed below. Slide ME03, Cy5(635nm) (strain Nau, Rep2) Slide ME04, Cy5(635nm) (strain Nau, Rep2) Slide ME06, Cy5(635nm) (strain Maj, Rep2) Slide ME09, Cy5(635nm) (strain Nau, Rep2)

2004-10-05 | E-MEXP-179 | biostudies-arrayexpress

Rodentolepis nana

Project description:Hymenolepis nana overview

| PRJNA301759 | ENA

Paracyclopina nana

Project description:Paracyclopina nana overview

| PRJNA290814 | ENA

Rodentolepis nana

Project description:Rodentolepis nana Raw sequence reads

| PRJNA291751 | ENA

Alnus alnobetula, Betula nana, Salix sp

Project description:Holocene chloroplast genetic variation of shrubs (Alnus alnobetula, Betula nana, Salix sp.) at the Siberian tundra-taiga ecotone.

| PRJNA616329 | ENA

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