ABSTRACT: EMG produced TPA metagenomics assembly of the Comparison between mouse caecal contents and faeces (Mouse_caecal_contents_vs_faeces) data set.
Project description:We compared the microbiota of paired mouse caecal contents and faeces by applying a multi-omic approach, including 16S rDNA sequencing, shotgun metagenomics, and shotgun metaproteomics. The aim of the study was to verify whether faecal samples are a reliable proxy for the mouse colonic luminal microbiota, as well as to identify changes in taxonomy and functional activity between caecal and faecal microbial communities, which have to be carefully considered when using stool as sample for mouse gut microbiota investigations.
Project description:Comparison between mouse caecal contents and faeces
| PRJEB15341 | ENA
Project description:EMG produced TPA metagenomics assembly of PRJNA389749 data set (Caecal Metagenome of Pigs).
| PRJEB53516 | ENA
Project description:EMG produced TPA metagenomics assembly of PRJNA193217 data set (Chicken cecal contents Metagenome).
| PRJEB41355 | ENA
Project description:EMG produced TPA metagenomics assembly of PRJNA291299 data set (Caecal microbiome metagenome of laying hens).
| PRJEB41442 | ENA
Project description:EMG produced TPA metagenomics assembly of PRJNA479723 data set (Nanopore metagenomics).
| PRJEB42552 | ENA
Project description:EMG produced TPA metagenomics assembly of PRJEB25419 data set (Breast Cancer Metagenomics).
| PRJEB51311 | ENA
Project description:EMG produced TPA metagenomics assembly of PRJEB33338 data set (Metagenomics of chicken cecal contents from fast and slower growing birds).
| PRJEB50262 | ENA
Project description:EMG produced TPA metagenomics assembly of PRJNA650216 data set (PMC 728.11_cyano).
| PRJEB44369 | ENA
Project description:EMG produced TPA metagenomics assembly of the Compositional_dynamics_of_intestinal_spore_forming_bacteria (Compositional_dynamics_of_intestinal_spore_forming_bacteria) data set.
