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Time course DNase assays on Drosophila melanogaster and Drosophila virilis embryos during embryogenesis II

ABSTRACT: Time course DNase assays on Drosophila melanogaster and Drosophila virilis embryos during embryogenesis II

PROVIDER: PRJEB40271 | ENA |

REPOSITORIES: ENA

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Time course DNase assays on Drosophila melanogaster and Drosophila virilis embryos during embryogenesis

Project description:Time course DNase assays on Drosophila melanogaster and Drosophila virilis embryos during embryogenesis

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Time course DNase assays on Drosophila melanogaster and Drosophila virilis embryos during embryogenesis

Project description:DNase-seq over 3 matching developmental time points in Drosophila melanogaster and Drosophila virilis embryos was performed. The aim is to assess conservation of hypersensitive regions between two distantly related species. Samples were sequenced using Illumina HiSeq.

2019-10-19 | E-MTAB-3797 | biostudies-arrayexpress

Time course DNase assays on Drosophila melanogaster and Drosophila virilis embryos during embryogenesis II

Project description:DNase-seq over 2 matching developmental time points in Drosophila melanogaster and Drosophila virilis embryos was performed. The aim is to assess conservation of hypersensitive regions between two distantly related species. Samples were sequenced using Illumina NextSeq. This Study is an extension to the previously published Study E-MTAB-3797.

2021-05-21 | E-MTAB-9480 | biostudies-arrayexpress

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Project description:Gene annoation and determination of gene expression levels in Drosophila virilis and Drosophila yakuba by deep sequencing.

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Time course Chromatin Immunoprecipitation on Drosophila virilis embryos during embryogenesis

Project description:Time course Chromatin Immunoprecipitation on Drosophila virilis embryos during embryogenesis

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Project description:Drosophila virilis Genome sequencing

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Tissue-specific DNase-seq Time Course during Drosophila melanogaster embryogenesis

Project description:Chromatin accessibility mapping by DNase-seq on whole embryo and FACS-isolated cell populations during Drosophila melanogaster embryogenesis at 2-4 hrs, 4-6 hrs, 6-8 hrs, 8-10 hrs and 10-12 hrs after egg-laying. Note that the two 8 bases long UMIs clipped from read1 and read2 are present in the FastQ file header (followed by the 8 bp long invariant sample barcode)

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