Dataset Information

ABSTRACT: EMG produced TPA metagenomics assembly of PRJNA289586 data set (Human Gut Microbiome in a Multiplex Family Study of Type 1 Diabetes Mellitus).

PROVIDER: PRJEB43036 | ENA |

REPOSITORIES: ENA

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Publications

EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.

Mitchell Alex L AL Scheremetjew Maxim M Denise Hubert H Potter Simon S Tarkowska Aleksandra A Qureshi Matloob M Salazar Gustavo A GA Pesseat Sebastien S Boland Miguel A MA Hunter Fiona M I FMI Ten Hoopen Petra P Alako Blaise B Amid Clara C Wilkinson Darren J DJ Curtis Thomas P TP Cochrane Guy G Finn Robert D RD

Nucleic acids research 20180101 D1

EBI metagenomics (http://www.ebi.ac.uk/metagenomics) provides a free to use platform for the analysis and archiving of sequence data derived from the microbial populations found in a particular environment. Over the past two years, EBI metagenomics has increased the number of datasets analysed 10-fold. In addition to increased throughput, the underlying analysis pipeline has been overhauled to include both new or updated tools and reference databases. Of particular note is a new workflow for tax ...[more]

PMID: 29069476

Dataset Information

Publications

EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.

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