Project description:RNA-prep of Col and hcr2 mutant from seedling and bud sample. RNA extracted by Trizol and cDNA was synthesized by using the ScriptSeq v2 RNA-seq Library Preparation Kit (SSV21124, Epicentre). ScriptSeq Index PCR Primers (RSBC10948, Epicentre) were used for library construction.

2022-03-23 | E-MTAB-10791 | biostudies-arrayexpress

RNA-seq of Arabidopsis thaliana Col-0 siliques

Project description:Paired-end Illumina RNA sequencing of Arabidopsis thaliana Col-0 siliques.

2016-11-16 | GSE89617 | GEO

Transcriptome of Arabidopsis thaliana mem1-1 mutant

Project description:Transcriptome of Arabidopsis thaliana mem1-1 mutant and Col-0 under normal and 200ppm MMS treatment conditions, respectively

2021-08-04 | GSE181302 | GEO

RNAseq of Arabidopsis thaliana Col-0 inflorescences

Project description:Paired-end Illumina RNA sequencing of Arabidopsis thaliana Col-0 inflorescences

2016-11-14 | GSE74717 | GEO

Arabidopsis thaliana ecotype Col-0 versus T-DNA mutant sir1-1

Project description:Arabidopsis thaliana Col-0 plants were compared to sir1-1 T-DNA insertion mutants to investigate transcript levels of sulfur metabolism related genes under standard conditions.

2010-03-12 | GSE20670 | GEO

Bisulfite-seq in Arabidopsis thaliana Col and hcr2 mutant

Project description:DNA-prep of Col and hcr2 mutant from seedling and bud sample. DNA was extracted using DNeasy Plant Mini Kit (Qiagen 69104, USA). Library construction and bisulfite conversion was performed using EZ DNA Methylation-Gold kit (ZYMO). DNA libraries are sequenced on the DNBseq platform (BGI, Hong Cong).

2022-03-23 | E-MTAB-10657 | biostudies-arrayexpress

ATAC-seq in Arabidopsis thaliana Col and hcr2 mutant

Project description:ATAC-seq of Col and hcr2 mutant from seedling and bud sample. Tagmentation was performed using the Tag DNA enzyme & buffer kit (Illumina, 20034210). Nextera DNA CD Index primers were used for library construction. The indexed libraries were subjected to paired-end 50-bp sequencing using an Illumina HiSeqX instrument (Microgen, Korea).

2022-03-23 | E-MTAB-10790 | biostudies-arrayexpress

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