Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Planktonic particle-associated bacteria dominate the colony-forming microbiome on ZoBell marine agar 2216

ABSTRACT: Microbiomes of marine bacteria culturable on plates

PROVIDER: PRJEB50169 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Automated counting of bacterial colony forming units on agar plates.

Project description: Not available

| S-EPMC3308999 | biostudies-literature

NR4A1 promotes PDGF-BB-induced cell colony formation in soft agar.

Project description: Not available

| S-EPMC4182636 | biostudies-literature

KSHV infection of Endothelial Colony Forming Cells

Project description:We performed high throughput RNA-sequencing on KSHV-infected blood and lymphatic Endothelial Colony-Forming Cells at 48hpi to identify differences in gene expression induced by KSHV in these two cell types.

2022-11-28 | GSE207589 | GEO

TAL1 in human Endothelial Colony-Forming Cells

Project description:This SuperSeries is composed of the SubSeries listed below.

2014-05-02 | GSE44546 | GEO

Rapid Assay of Individual Microbiome responses to drugs part1

Project description:We developed an approach named Rapid Assay of Individual Microbiome (RapidAIM) to screen xenobiotics against individual microbiomes, and conducted a proof-of-concept (POC) study on the use of RapidAIM. We tested 43 compounds against five individual microbiomes. The individual microbiomes are cultured in 96-well plates for 24 hours and the samples are then analyzed using a metaproteomics-based analytical approach to gain functional insight into the individual microbiomes responses following drug treatments.The tested compounds significantly affected overall microbiome abundance, microbiome composition and functional pathways at multiple taxonomic levels. The microbiome responses to berberine, metformin, diclofenac, fructooligosaccharide and most antibiotics were consistent among most individual microbiomes. Interestingly, most of our tested NSAIDs, statins, and histamine-2 blockers induced individually distinct responses. Our workflow offers an effective solution to systematically study the effects of many different compounds on individual microbiomes.

2020-05-26 | PXD012724 | Pride

A few cosmopolitan phylotypes dominate planktonic archaeal assemblages in widely different oceanic provinces.

Project description: Not available

| S-EPMC101412 | biostudies-literature

Priority effects in a planktonic bloom-forming marine diatom.

Project description: Not available

| S-EPMC4455744 | biostudies-literature

Confinement discerns swarmers from planktonic bacteria.

Project description: Not available

| S-EPMC8112864 | biostudies-literature

miRNA expression of tube forming HUVECs

Project description:To identify the miRNAs specifically upregulated during tube formation of primary endothelial cells , HUVECs were cultured in culture plates with or without matrigel-coating and the miRNAs from them were compared.

2017-08-11 | GSE56663 | GEO

Transcription profiles of che and flgM mutants of Typhimurium 14028 at 3h on agar plates

Project description:Transcription profiles of Typhimurium 14028 wt versus 14028 cheA, cheB, cheZ, flgM and flgM/cheY mutants at 3h on agar plates Keywords: other

2005-08-23 | GSE2341 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data