Genomics

Dataset Information

235

Root transcript profiles of two Rorippa (Brassicaceae) species and their F1 hybrid after complete submergence


ABSTRACT: Root transcript profiles of two Rorippa (Brassicaceae) species and their F1 hybrid after complete submergence

PROVIDER: PRJNA110189 | ENA |

REPOSITORIES: ENA

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Publications

Root transcript profiling of two Rorippa species reveals gene clusters associated with extreme submergence tolerance.

Sasidharan Rashmi R   Mustroph Angelika A   Boonman Alex A   Akman Melis M   Ammerlaan Ankie M H AM   Breit Timo T   Schranz M Eric ME   Voesenek Laurentius A C J LA   van Tienderen Peter H PH  

Plant physiology 20130927 3


Complete submergence represses photosynthesis and aerobic respiration, causing rapid mortality in most terrestrial plants. However, some plants have evolved traits allowing them to survive prolonged flooding, such as species of the genus Rorippa, close relatives of Arabidopsis (Arabidopsis thaliana). We studied plant survival, changes in carbohydrate and metabolite concentrations, and transcriptome responses to submergence of two species, Rorippa sylvestris and Rorippa amphibia. We exploited the  ...[more]

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