Genomics

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Metatranscriptomic array analysis of “Candidatus Accumulibacter phosphatis”-enriched EBPR Sludge


ABSTRACT: Metatranscriptomic array analysis of “Candidatus Accumulibacter phosphatis”-enriched EBPR Sludge

PROVIDER: PRJNA120099 | ENA |

REPOSITORIES: ENA

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Metatranscriptomic array analysis of 'Candidatus Accumulibacter phosphatis'-enriched enhanced biological phosphorus removal sludge.

He Shaomei S   Kunin Victor V   Haynes Matthew M   Martin Hector Garcia HG   Ivanova Natalia N   Rohwer Forest F   Hugenholtz Philip P   McMahon Katherine D KD  

Environmental microbiology 20100209 5


Here we report the first metatranscriptomic analysis of gene expression and regulation of 'Candidatus Accumulibacter'-enriched lab-scale sludge during enhanced biological phosphorus removal (EBPR). Medium density oligonucleotide microarrays were generated with probes targeting most predicted genes hypothesized to be important for the EBPR phenotype. RNA samples were collected at the early stage of anaerobic and aerobic phases (15 min after acetate addition and switching to aeration respectively)  ...[more]

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