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Arabidopsis thaliana and Arabidopsis lyrata degradomes

ABSTRACT: Arabidopsis thaliana and Arabidopsis lyrata degradomes

PROVIDER: PRJNA125109 | ENA |

REPOSITORIES: ENA

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Comparative transcriptome profiling of Arabidopsis lyrata and Arabidopsis thaliana

Project description:Arabidopsis thaliana and Arabidopsis lyrata are two closely related Brassicaceae species, which are used as models for plant comparative biology. They differ by lifestyle, predominant mating strategy, ecological niches and genome organization. In order to explore molecular basis of specific traits, we performed RNA-sequencing of vegetative rosettes from both species. Additionally, we sequenced apical meristems and inflorescences of A. lyrata that allow for intra-specific transcriptome comparison in several major developmental stages. Please view also related dataset GSE69077 (RNA-sequencing of heat stressed A. lyrata and A. thaliana plants).

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Arabidopsis thaliana and Arabidopsis lyrata degradomes

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Comparative transcriptome analysis in response to heat stress in Arabidopsis thaliana and Arabidopsis lyrata

2015-08-01 | GSE69077 | GEO

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MIRNA Gene Evolution in Arabidopsis lyrata and Arabidopsis thaliana: 454 sequencing

Project description:Deep sequencing of small RNA from three closely related brassicaceae A. thaliana, A. lyrata and Capsella rubella was done to systematically analyze the evolution of MIRNA genes and their targets.

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