Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Arabidopsis thaliana

ABSTRACT: Impact of RAP2.12 alterations on gene expression in hypoxic and aerobic conditions

OTHER RELATED OMICS DATASETS IN: E-GEOD-29187

PROVIDER: PRJNA139995 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Arabidopsis thaliana

Project description:The impact of cell wall alterations on global gene expression. Comparative analysis of mutant.

| PRJNA97853 | ENA

Arabidopsis thaliana

Project description:Gene expression from Arabidopsis under high light conditions

| PRJNA127985 | ENA

Impact of RAP2.12 alterations on gene expression in hypoxic and aerobic conditions in Arabidopsis thaliana

Project description:In this study we analyzed the effect of overexpression of an HA-tagged version of the ERF RAP2.12 on the transcriptome levels in aerobic and hypoxic-treated (O2 21% and 1%, respectively) Arabidopsis thaliana rosettes. We also analyzed the effect of a RAP2.12 and RAP2.2 simultaneous silencing in aerobic and hypoxic-treated (O2 21% and 1%, respectively) Arabidopsis thaliana rosettes. We treated Arabidopsis Col-0 (wt) rosettes and transgenic HA::RAP2.12 and amiRAP2.2-12 , 5-week old, grown in 8/16 light/dark photoperiod with: -Control (22°C, dark, 21% O2, 1.5h). -Hypoxia (22°C, dark, 1% O2, 1.5h).

2011-10-13 | E-GEOD-29187 | biostudies-arrayexpress

Arabidopsis thaliana

Project description:The impact of cell wall alterations on global gene expression.Overexpressor against wild type.

| PRJNA97851 | ENA

Arabidopsis thaliana

Project description:Gene expression in pif1pif3pif4pif5 mutant under dark or red light conditions

| PRJNA119655 | ENA

Transcription profiling of Arabidopsis - effect of AtHRE1 and AtHRE2 overexpression in normoxia and hypoxia

Project description:HRE1 and HRE2 are two ERF transcription factors induced by low oxygen. In this work we analyzed the effect of ectopic expression of HRE1 and HRE2 on the arabidopsis transcriptome in aerobic and hypoxic (1% O2) conditions. While HRE1 has a moderate effect on the expression of anaerobic genes under hypoxia, HRE2 does not affect them either under aerobic or hypoxic conditions. Experiment Overall Design: We treated Arabidopsis seedling Col-0 (wt) and transgenic 35S::HRE1 and 35S::HRE2 , 7-day old, germinated in 12/12 light/dark photoperiod with: Experiment Overall Design: -Control (23Â°C, dark, 21% O2, 4h). Experiment Overall Design: -Hypoxia (23Â°C, dark, 1% O2, 4h). Experiment Overall Design: Two biological replicates for each condition.

2009-11-10 | E-GEOD-17099 | biostudies-arrayexpress

Arabidopsis thaliana

Project description:Hypoxic Stress

| PRJNA92107 | ENA

Role of Hog1 in oxygen regulation of gene expression

Project description:Expression microarrays of WT vs. hog1D cells in aerobic or 5 hours of hypoxic growth (100% nitrogen gas). Two strains (WT vs. hog1 deletion), two conditions (aerobic vs. 5 hours hypoxic), two biological replicates each strain/condition.

2011-01-13 | E-GEOD-26593 | biostudies-arrayexpress

Arabidopsis thaliana

Project description:Global gene expression of Arabidopsis lines with altered ANAC102 expression under normal and low oxygen conditions

| PRJNA111505 | ENA

Role of S. cerevisiae Hap1 in oxygen-regulation

Project description:Expression microarray experiments were performed to identify all of the aerobic and hypoxic transcripts in wild-type cells. The role of Hap1 in the regulation of transcription was examined by monitoring gene expression in hap1 deletion cells. Keywords: gene expression, strain comparison, response to hypoxic conditions

2007-07-28 | GSE8613 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data