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Arabidopsis thaliana

ABSTRACT: Expression analysis of root cell types after treatment with sulfur deficient media

OTHER RELATED OMICS DATASETS IN: E-GEOD-30095

PROVIDER: PRJNA155181 | ENA |

REPOSITORIES: ENA

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Cell-type, developmental stage, and whole root responses to low pH and sulfur deficiency

Project description:This SuperSeries is composed of the following subset Series: GSE30091: Expression analysis of the effect of protoplasting and sorting in roots exposed to low pH GSE30095: Expression analysis of root cell types after treatment with low pH GSE30096: Expression analysis of developmental stages of Arabidopsis roots exposed to low pH GSE30097: Time-course expression analysis of the low pH (pH 4.6) response in Arabidopsis whole roots GSE30098: Expression analysis time-course of Arabidopsis roots to sulfur deficiency GSE30099: Expression analysis of root cell types after treatment with sulfur deficient media GSE30100: Expression analysis of developmental stages of Arabidopsis roots exposed to sulfur deficient media GSE30104: Genome-wide identification of SCARECROW (SCR) direct targets using a custom Agilent promoter array Refer to individual Series

2011-11-23 | E-GEOD-30166 | biostudies-arrayexpress

Arabidopsis thaliana

Project description:Expression analysis of developmental stages of Arabidopsis roots exposed to sulfur deficient media

| PRJNA155183 | ENA

Arabidopsis thaliana

Project description:Expression analysis of root cell-types after treatment with salt

| PRJNA99837 | ENA

Arabidopsis thaliana

Project description:Expression analysis of root cell types after treatment with low pH

| PRJNA155173 | ENA

Arabidopsis thaliana

Project description:Expression analysis of root cell-types after iron deficiency (-Fe) treatment

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Arabidopsis thaliana

Project description:Expression analysis of root pericycle cell-types after iron deficiency (-Fe) treatment

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Expression analysis of developmental stages of Arabidopsis roots exposed to sulfur deficient media

Project description:To understand the effect of sulfur deficiency on developmental stages in the root, we dissected the root into four developmental zones after exposure to sulfur deficiency and expression profiled each zone. Stress responses in plants are tightly coordinated with developmental processes, but the interaction between these pathways is poorly understood. Here we use genome-wide assays at high spatial and temporal resolution to understand the processes that lnk development and stress in the Arabidopsis root. Our meta-analysis finds little evidence for a universal stress response. Common stress responses appear to exists and, analagous to animal systems, many of them show cell-type specificity, suggesting a convergent evolutionary theme in multicellular organisms. Common stress responses may be mediated by cell identity regulators, as mutations in these genes resulted in altered responses to stress. Our results reveal surprising linkages between stress and development at cellular resolution, and show the power of multiple genome-wide datasets to elucidate biological processes. 2 replicates each of 4 developmental stages exposed to sulfur deficient media

2011-11-23 | E-GEOD-30100 | biostudies-arrayexpress

Arabidopsis thaliana

Project description:Expression analysis of root developmental zones after treatment with salt

| PRJNA99773 | ENA

Arabidopsis thaliana

Project description:Expression analysis of root developmental zones after iron deficiency (-Fe) treatment

| PRJNA108929 | ENA

Arabidopsis thaliana

Project description:Root Transcriptome of WT, SDI1 Overexpression Lines and sdi1sdi2 Double Knockouts Grown under Sulfur Sufficient and Deficient Conditions

| PRJNA321336 | ENA

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