Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bacillus subtilis subsp. subtilis str. JH642 substr. AG174

ABSTRACT: Bacillus subtilis subsp. subtilis str. JH642 substr. AG174 Genome sequencing

PROVIDER: PRJNA172410 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

RNA-seq established gene expression data to determine the effects of various stresses on Bacillus subtilis str.168

Project description:To explore the effects of different stress conditions on Bacillus subtilis str.168, a selection of conditions were applied to the organism and RNA-seq data gathered. A matrix of gene counts was produced as a basis for further analysis into the transcription profiles of Bacillus subtilis str.168.

2023-03-03 | GSE226559 | GEO

Bacillus subtilis WalR (YycF) ChIP-chip Bacillus subtilis; Bacillus subtilis subsp. subtilis str. 168

2015-01-26 | GSE65272 | GEO

Undomesticated Bacillus subtilis RemA regulon

Project description:Transcriptional profiling of Bacillus subtilis str 3610 cells comparing sinR-/epsH- cells to sinR-/epsH-/remA- cells in MSgg Medium at optical density (600nm) of 1.0

2013-05-29 | GSE47409 | GEO

Undomesticated Bacillus subtilis SlrA regulon: wild-type vs two copies of slrA

Project description:Transcriptional profiling of Bacillus subtilis str 3610 cells comparing wild-type to cells containing two copies of the gene slrA.

2012-02-02 | GSE35456 | GEO

Bacillus subtilis WalR (YycF) ChIP-chip Bacillus subtilis; Bacillus subtilis subsp. subtilis str. 168

Project description:Identification of the specific WalR (YycF) binding regions on the B. subtilis chromosome during exponential and phosphate starvation growth phases. The data serves to extend the WalRK regulon in Bacillus subtilis and its role in cell wall metabolism, as well as implying a role in several other cellular processes. For each sample analyzed in this study three biological replicates were performed. Three different samples were taken from a strain expressing the WalR-SPA protein as well as from wild-type (168) without a tagged WalR. Samples were taken from exponentially growing cells in low phosphate medium (LPDM) as well as from phosphate-limited cells (T2). Each sample compares ChIP DNA vs. Total DNA from the same cells.

2015-01-26 | E-GEOD-65272 | biostudies-arrayexpress

Undomesticated Bacillus subtilis SlrA regulon: wild-type vs two copies of slrA

Project description:Transcriptional profiling of Bacillus subtilis str 3610 cells comparing wild-type to cells containing two copies of the gene slrA. wild-type vs slrAx2. Biological replicates 3

2012-02-02 | E-GEOD-35456 | biostudies-arrayexpress

Expression analysis of sporulating Bacillus subtilis strain 168 deleted for prpE gene

Project description:Investigation of whole genome gene expression level changes in sporulating Bacillus subtilis 168 delta-prpE mutant, compared to the wild-type strain. The mutation engineered into this strain results in impaired germination of spores. A six chip study using total RNA extracted from three separate wild-type cultures of sporulating Bacillus subtilis 168 and three separate cultures of sporulating mutant strain, Bacillus subtilis 168 delta-prpE, in which prpE (yjbP BSU11630) gene coding for a protein phosphatase is deleted entirely. Each chip consists of four fields able to measure the expression level of 4,104 genes from Bacillus subtilis subsp. subtilis strain 168 NC_000964 with eight 60-mer probe pairs (PM/MM) per gene, with two-fold technical redundancy.

2013-07-08 | E-GEOD-44125 | biostudies-arrayexpress

Bacillus subtilis subsp. subtilis str. B2

Project description:Bacillus subtilis subsp. subtilis str. B2 Genome sequencing

| PRJNA196560 | ENA

Bacillus subtilis subsp. subtilis str. R0179

Project description:Bacillus subtilis subsp. subtilis str. R0179 Genome sequencing

| PRJNA173232 | ENA

Bacillus subtilis subsp. subtilis str. SMY

Project description:Bacillus subtilis subsp. subtilis str. SMY Genome sequencing

| PRJNA615188 | ENA