Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Puccinia striiformis f. sp. tritici CY32

ABSTRACT: Puccinia striiformis f. sp. tritici CY32 Genome sequencing and assembly

PROVIDER: PRJNA176877 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Gene expression analysis of four conditions for Puccinia graminis f. sp. tritici

Project description:Puccinia graminis f. sp. tritici is the cause of wheat stem rust. A microarray was designed from genes predicted from the P. graminis f. sp. tritici genome assembly, and gene expression measured for four conditions which include wheat or barley infecting growth stages initiated by urediniospores. mRNA was prepared from fresh urediniospores, uredinospores germinated for 24 hr, wheat seedlings infected with urediniospores for 8 days, and barley seedlings infected with urediniospores for 8 days. The asexual uredinial infection cycle on wheat produces additional urediniospores, which can start new cycles of wheat infection and are readily spread by aerial transport. This expression data is further described in Duplessis et al, Obligate Biotrophy Features Unraveled by the Genomic Analysis of the Rust Fungi, Melampsora larici-populina and Puccinia graminis f. sp. tritici

2010-12-31 | GSE25020 | GEO

Puccinia striiformis f. sp. tritici

Project description:Puccinia striiformis f. sp. tritici Assembly

| PRJNA310371 | ENA

Gene expression analysis of four conditions for Puccinia graminis f. sp. tritici

2010-12-31 | E-GEOD-25020 | biostudies-arrayexpress

Puccinia striiformis f. sp. tritici

Project description:Puccinia striiformis f. sp. tritici Raw sequence reads

| PRJNA695106 | ENA

Transcription analysis by RNAseq of adult wheat after inoculation with Puccinia graminis f. sp. tritici

Project description:The RNA sequencing analysis was undertaken to investigate the transcriptomic changes in adult wheat inoculated with Puccinia graminis f. sp. tritici the causal agent of stem rust disease. The project firstly aims to compare gene expression in one susceptible wheat line with two wheat lines exhibiting adult plant resistance to the stem rust. Secondly, the project aims to examine the temporal changes in gene expression in wheat after inoculation. Wheat plants was grown until maturity under greenhouse conditions. Plants were inoculated with Puccinia graminis f. sp. tritici and the flag leaf sheath sampled for RNA sequencing. The project aims to give essential insight into the adult plant resistance response in wheat to Puccinia graminis f. sp. tritici inoculation.

2022-10-30 | E-MTAB-9681 | biostudies-arrayexpress

Puccinia striiformis f. sp. tritici strain:DK09_11

Project description:Puccinia striiformis f. sp. tritici alternate pseudohaplotype genome sequencing

| PRJNA595754 | ENA

Puccinia striiformis f. sp. tritici strain:DK09_11

Project description:Puccinia striiformis f. sp. tritici principal pseudohaplotype genome sequencing

| PRJNA595755 | ENA

Puccinia striiformis f. sp. tritici strain:38S102

Project description:Puccinia striiformis f. sp. tritici strain:38S102 Genome sequencing and assembly

| PRJNA344021 | ENA

Puccinia striiformis f. sp. tritici strain:DK0911

Project description:Puccinia striiformis f. sp. tritici strain:DK0911 Genome sequencing and assembly

| PRJNA595752 | ENA

Puccinia striiformis f. sp. tritici PST-78

Project description:Puccinia striiformis f. sp. tritici PST-78 Genome sequencing and assembly

| PRJNA41279 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data