Genomics

Dataset Information

529

Wastewater metagenome


ABSTRACT: Geographic Sewage Study Targeted Locus (Loci)

ORGANISM(S): wastewater metagenome  

PROVIDER: PRJNA189333 | ENA |

REPOSITORIES: ENA

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Publications

Acinetobacter, Aeromonas and Trichococcus populations dominate the microbial community within urban sewer infrastructure.

Vandewalle J L JL   Goetz G W GW   Huse S M SM   Morrison H G HG   Sogin M L ML   Hoffmann R G RG   Yan K K   McLellan S L SL  

Environmental microbiology 20120424 9


We evaluated the population structure and temporal dynamics of the dominant community members within sewage influent from two wastewater treatment plants (WWTPs) in Milwaukee, WI. We generated > 1.1 M bacterial pyrotag sequences from the V6 hypervariable region of 16S rRNA genes from 38 influent samples and two samples taken upstream in the sanitary sewer system. Only a small fraction of pyrotags from influent samples (∼ 15%) matched sequences from human faecal samples. The faecal components of  ...[more]

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