Project description:We isolated an efficient tetracycline degrading strain Sphingobacterium sp. WM1. To investigate gene expression patterns during tetracycline degradation by strain WM1, we conducted a comparative transcriptomic analysis using cultures of strain WM1 with and without tetracycline addition. The RNA-Seq data revealed that 90.44-96.56% of the reads mapped to the genome of Sphingobacterium sp. WM1 across all samples. Differentially expressed genes (DEGs) analysis (|log2FC| >2; p < 0.01) showed that 693 genes were significantly up-regulated and 592 genes were significantly down-regulated.

2023-09-21 | GSE234909 | GEO

Sphingobacterium alimentarium strain:DSM 22362 | isolate:DSM 22362

Project description:Sphingobacterium alimentarium DSM 22362 genome sequencing

| PRJNA334301 | ENA

Sphingobacterium soli strain:DSM 101679 | isolate:DSM 101679

Project description:Sphingobacterium soli DSM 101679 genome sequencing

| PRJNA632135 | ENA

Sphingobacterium lactis strain:DSM 22361 | isolate:DSM 22361

Project description:Sphingobacterium lactis DSM 22361 genome sequencing

| PRJNA329895 | ENA

Sphingobacterium lactis strain:DSM 22361

Project description:Sphingobacterium lactis strain:DSM 22361 Genome sequencing