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RNA-seq of poly(A)-/ribo- or poly(A)+ RNAs from human and mouse ES cells

ABSTRACT: RNA-seq of poly(A)-/ribo- or poly(A)+ RNAs from human and mouse ES cells

PROVIDER: PRJNA258364 | ENA |

REPOSITORIES: ENA

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RNA-seq of poly(A)-/ribo- or poly(A)+ RNAs from human and mouse ES cells

Project description:We have used RNA-seq to examine circular RNAs from poly(A)-/ribo- RNAs in human and mouse embryonic stem cells, and from from RNase R treated poly(A)-/ribo- RNAs in mouse embryonic stem cells.

2014-08-19 | GSE60467 | GEO

RNA-seq of poly(A)-/ribo- or poly(A)+ RNAs from human and mouse ES cells

Project description:We have used RNA-seq to examine circular RNAs from poly(A)-/ribo- RNAs in human and mouse embryonic stem cells In order to identify novel circular RNAs from different species

2014-08-19 | E-GEOD-60467 | biostudies-arrayexpress

RNA-seq of poly(A)-/ribo- or poly(A)+ RNAs from mouse and rhesus ES cells

Project description:We have used RNA-seq to examine circular RNAs from RNase R treated poly(A)-/ribo- RNAs in human embryonic stem cells

2014-01-10 | GSE53942 | GEO

RNA-seq of poly(A)-/ribo- or poly(A)+ RNAs from mouse and rhesus ES cells

Project description:RNA-seq of poly(A)-/ribo- or poly(A)+ RNAs from mouse and rhesus ES cells

| PRJNA234004 | ENA

RNA-seq of poly(A)-/ribo- or poly(A)+ RNAs from mouse and rhesus ES cells

Project description:We have used RNA-seq to examine circular RNAs from RNase R treated poly(A)-/ribo- RNAs in human embryonic stem cells to identify novel lncRNAs from different species

2014-01-10 | E-GEOD-53942 | biostudies-arrayexpress

RNA-seq of RNase R treated poly(A)-/ribo- RNAs from H9 cells

Project description:We have used RNA-seq to examine circular RNAs from RNase R treated poly(A)-/ribo- RNAs in human embryonic stem cells Examine circular RNAs in human embryonic stem cells

2013-06-18 | E-GEOD-48003 | biostudies-arrayexpress

RNA-seq of RNase R treated poly(A)-/ribo- RNAs from H9 cells

Project description:We have used RNA-seq to examine circular RNAs from RNase R treated poly(A)-/ribo- RNAs in human embryonic stem cells

2013-06-18 | GSE48003 | GEO

RNA-seq of poly(A)-/ribo- or poly(A)+ RNAs from human and mouse ES cells

Project description:We have used RNA-seq to examine circular RNAs from poly(A)-/ribo- RNAs in human and mouse embryonic stem cells

| OEX000088 | NODE

RNA-seq of poly(A)-/ribo- or poly(A)+ RNAs from human and mouse ES cells

Project description:We have used RNA-seq to examine circular RNAs from poly(A)-/ribo- RNAs in human and mouse embryonic stem cells

| OEX000089 | NODE

Small RNAs in differentiating mouse ES cells

Project description:RNA-interference (RNAi) refers to a growing class of gene silencing phenomena defined by a requirement for small RNAs of 20-32 nt and the action of the Argonaute (Ago) family of ribonucleases. We have previously identified developmentally regulated small RNAs, using Northern blot analysis, that are expressed during X-chromosome inactivation in differentiating female mouse ES cels. We sought to identify these small RNAs using deep sequencing. We identified small RNAs that align to retrotransposon sequences and are enriched on the X-chromosome. LINE elements have been proposed to act as way stations during X-inactivation for the spreading of silencing along the entire chromosome, and our findings suggest that LINE elements found on the X-chromosome may be enriched for small RNAs relative to the genome. These results suggest that RNAi pathways are involved in regulating LINE elements during X-inactivation and ES cell differentiation.

2013-05-18 | GSE21888 | GEO

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