Genomics

Dataset Information

471

Vibrio cholerae


ABSTRACT: Vibrio cholerae Genome sequencing

ORGANISM(S): Vibrio cholerae  

PROVIDER: PRJNA263670 | ENA |

REPOSITORIES: ENA

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Publications


Phylodynamic analysis of genome-wide single-nucleotide polymorphism (SNP) data is a powerful tool to investigate underlying evolutionary processes of bacterial epidemics. The method was applied to investigate a collection of 65 clinical and environmental isolates of Vibrio cholerae from Haiti collected between 2010 and 2012. Characterization of isolates recovered from environmental samples identified a total of four toxigenic V. cholerae O1 isolates, four non-O1/O139 isolates, and a novel nontox  ...[more]

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