Genomics

Dataset Information

235

Brachionus sp. 'koreanus'


ABSTRACT: Brachionus sp. 'koreanus' Transcriptome or Gene expression

ORGANISM(S): Brachionus koreanus  

PROVIDER: PRJNA267756 | ENA |

REPOSITORIES: ENA

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Publications

Whole transcriptome analysis of the monogonont rotifer Brachionus koreanus provides molecular resources for developing biomarkers of carbohydrate metabolism.

Lee Bo-Young BY   Kim Hui-Su HS   Hwang Dae-Sik DS   Won Eun-Ji EJ   Choi Beom-Soon BS   Choi Ik-Young IY   Park Heum Gi HG   Rhee Jae-Sung JS   Lee Jae-Seong JS  

Comparative biochemistry and physiology. Part D, Genomics & proteomics 20150223


Rotifers (phylum Rotifera) are the most common non-arthropod animal. Species in the monogonont rotifer Brachionus are widely distributed in coastal areas and play an important role in aquatic food webs as secondary producers. Brachionus koreanus is currently being developed as a model system for ecotoxicological research. We sequenced the whole transcriptome of B. koreanus using RNA-seq technology. De novo sequence assembly by Trinity integrated with TransDecoder produced 36,918 contigs, includi  ...[more]

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