Genomics

Dataset Information

578

Trachymyrmex zeteki isolate:Tzet28-1


ABSTRACT: Trachymyrmex zeteki isolate:Tzet28-1 Genome sequencing and assembly

ORGANISM(S): Trachymyrmex zeteki  

PROVIDER: PRJNA292628 | ENA |

REPOSITORIES: ENA

Dataset's files

Source:
Action DRS
LKFA01.dat.gz Other
LKFA01.fasta.gz Fasta.gz
LKFA01.master.dat Other
SRR3168626_1.fastq.gz Fastqsanger.gz
SRR3168626_2.fastq.gz Fastqsanger.gz
Items per page:
1 - 5 of 14
altmetric image

Publications

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Lowe T M TM   Eddy S R SR  

Nucleic acids research 19970301 5


We describe a program, tRNAscan-SE, which identifies 99-100% of transfer RNA genes in DNA sequence while giving less than one false positive per 15 gigabases. Two previously described tRNA detection programs are used as fast, first-pass prefilters to identify candidate tRNAs, which are then analyzed by a highly selective tRNA covariance model. This work represents a practical application of RNA covariance models, which are general, probabilistic secondary structure profiles based on stochastic c  ...[more]

Similar Datasets

| PRJNA315918 | ENA
| PRJNA315802 | ENA
2020-01-01 | S-EPMC7092486 | BioStudies
| PRJNA292627 | ENA
2018-01-01 | S-EPMC6211366 | BioStudies
2008-01-01 | S-EPMC2565983 | BioStudies
| PRJNA292625 | ENA
2017-01-01 | S-EPMC5674085 | BioStudies
2018-01-01 | S-EPMC5854769 | BioStudies
2011-01-01 | S-EPMC3244503 | BioStudies