Project description:We isolated an efficient doxycycline degrading strain Chryseobacterium sp. WX1. To investigate gene expression patterns during doxycyclinedegradation by strain WX1, we conducted a comparative transcriptomic analysis using cultures of strain WX1 with and without doxycycline addition. The RNA-Seq data revealed that 90.44-96.56% of the reads mapped to the genome of Chryseobacterium sp. WX1 across all samples. Differentially expressed genes (DEGs) analysis (|log2FC| >2; p < 0.01) showed that 693 genes were significantly up-regulated and 592 genes were significantly down-regulated.

2023-09-12 | GSE242785 | GEO

Flavobacterium aquaticum strain:JC164

Project description:Flavobacterium aquaticum JC164 genome sequencing

| PRJNA346218 | ENA

Myriophyllum aquaticum breed:Myriophyllum aquaticum

Project description:Myriophyllum aquaticum breed:Myriophyllum aquaticum Raw sequence reads

| PRJNA497710 | ENA

Halorubrum aquaticum strain:cgmcc 1.6377

Project description:Halorubrum aquaticum CGMCC 1.6377 genome sequencing

| PRJNA303461 | ENA

Chryseobacterium rhizosphaerae strain:KCTC 22548

Project description:Chryseobacterium rhizosphaerae strain:KCTC 22548 Genome sequencing and assembly