Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Streptococcus equi subsp. equi strain:Lex90

ABSTRACT: Streptococcus equi subsp. equi strain:Lex90 Genome sequencing and assembly

PROVIDER: PRJNA313215 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

RNA sequencing of Streptococcus equi subsp. equi collected from carrier and acute cases

Project description:Streptococcus equi subsp. equi (SEE) is a host-restricted bacterium that causes the common infectious upper respiratory disease known as strangles in horses. Perpetuation of SEE infection appears attributable to inapparent carrier horses because it does not persist long-term in the environment, infect other host mammals or vectors, and result in short-lived immunity. Whether pathogen factors enable SEE to remain in horses without causing clinical signs remains poorly understood. Thus, our objective was to use next-generation sequencing technologies to characterize the transcriptome of isolates of SEE from horses with acute clinical strangles and inapparent carrier horses to assess pathogen-associated changes that might reflect adaptions of SEE to the host contributing to inapparent carriage. RNA sequencing of SEE isolates from Pennsylvania demonstrated no genes that were differentially expressed between acute clinical and inapparent carrier isolates of SEE.

2021-05-28 | GSE167862 | GEO

Investigation of the transcriptional changes associated with phenotype switching in Streptococcus equi subspecies equi strain 1691.

Project description:Streptococcus equi subspecies equi, strain 1691 grown on COBA streptococcal selective agar shows classical mucoid colony morphology in addition to a reduced capsule phenotype. This project aimed to identify changes in the transcriptional profile between the two morphologies.

2016-12-15 | E-MTAB-4147 | biostudies-arrayexpress

Streptococcus equi subsp. equi

Project description:Streptococcus equi subsp. equi Genome sequencing and assembly

| PRJNA805196 | ENA

Streptococcus equi subsp. equi

Project description:Streptococcus equi subsp. equi Genome sequencing and assembly

| PRJNA214018 | ENA

Streptococcus equi subsp. equi strain:19

Project description:Streptococcus equi subsp. equi strain:19 Genome sequencing and assembly

| PRJNA300422 | ENA

Streptococcus equi subsp. equi strain:CF22

Project description:Streptococcus equi subsp. equi strain:CF22 Genome sequencing and assembly

| PRJNA300620 | ENA

Streptococcus equi subsp. equi strain:CF22

Project description:Streptococcus equi subsp. equi strain:CF22 Genome sequencing

| PRJNA300420 | ENA

Streptococcus equi subsp. equi strain:1-8

Project description:Streptococcus equi subsp. equi strain:1-8 Genome sequencing and assembly

| PRJNA300421 | ENA

Streptococcus equi subsp. equi strain:ATCC 39506

Project description:Streptococcus equi subsp. equi strain:ATCC 39506 Genome sequencing and assembly

| PRJNA388268 | ENA

Streptococcus equi subsp. equi

Project description:Whole genome sequencing of Streptococcus equi subsp. equi, an opportunistic pathogen

| PRJDB1841 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data