Project description:Analysis of SCC-9 tongue cancer cells overexpressing miR-585-5p. miR-585-5p is frequently downregulated in primary tongue cancer. Results provide insight into the role of miR-585-5p in the pathogenesis of tongue cancer. We used micorarrays to detailed the genes regulated by miR-585-5p in SCC-9 cells.

2018-05-08 | GSE114093 | GEO

Pseudomonas alcaligenes MRY13-0052

Project description:Whole-genome shotgun sequencing of Pseudomonas alcaligenes

| PRJDB1470 | ENA

Pseudomonas alcaligenes NBRC 14159

Project description:Pseudomonas alcaligenes NBRC 14159 genome sequencing project

| PRJDB200 | ENA

Pseudomonas alcaligenes strain:AVO110

Project description:Pseudomonas alcaligenes strain:AVO110 Genome sequencing and assembly

| PRJNA324767 | ENA

Alcaligenes

Project description:Alcaligenes sp. overview

| PRJNA182074 | ENA

Transcriptome data of Alcaligenes sp. HO-1 in response to ammonium stimulation at several time points.

Project description:A heterotrophic ammonia-oxidizing bacterium Alcaligenes sp. HO-1 was isolated from the activated sludge of a bioreactor treating ammonia-rich piggery wastewater. The goal and objectives of this experiment are to analyze the transcriptome profiles of nitrogen-metabolism-related genes of Alcaligenes sp. HO-1 in response to ammonium stimulation over time and to find out potential genes involved in ammonia oxidation process. So the RNA-seq anaylsis was performed by setting up each time points (0, 3.5, 10, 22 hours) when strain HO-1 were exposed to ammonia. HO-1 was cultured with 83 mM succinate and 14 mM ammonium sulfate until ammonia was completely consumed and then another 14 mM of ammonium sulfate was added to the culture. Cells were harvested at 0 h, 3.5 h, 10 h and 22 h after the addition of ammonium sulfate. The sequencing data of RNAs obtained from strain HO-1 cells at each time was analyzed.

2022-05-20 | GSE174685 | GEO

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