Genomics

Dataset Information

235

Mus musculus


ABSTRACT: Active and inactive enhancers co-operate to exert localized and long-range control of gene regulation [ATAC-seq]

ORGANISM(S): Mus musculus  

PROVIDER: PRJNA318458 | ENA |

REPOSITORIES: ENA

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Publications

Active and Inactive Enhancers Cooperate to Exert Localized and Long-Range Control of Gene Regulation.

Proudhon Charlotte C   Snetkova Valentina V   Raviram Ramya R   Lobry Camille C   Badri Sana S   Jiang Tingting T   Hao Bingtao B   Trimarchi Thomas T   Kluger Yuval Y   Aifantis Iannis I   Bonneau Richard R   Skok Jane A JA  

Cell reports 20160526 10


V(D)J recombination relies on the presence of proximal enhancers that activate the antigen receptor (AgR) loci in a lineage- and stage-specific manner. Unexpectedly, we find that both active and inactive AgR enhancers cooperate to disseminate their effects in a localized and long-range manner. Here, we demonstrate the importance of short-range contacts between active enhancers that constitute an Igk super-enhancer in B cells. Deletion of one element reduces the interaction frequency between othe  ...[more]

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