Project description:Strain SM1988T is a Gram-negative, aerobic, oxidase- and catalase-positive, unipolar flagellated, and rod-shaped bacterium capable of hydrolyzing casein, gelatin and collagens. Phylogenetic analysis revealed that strain SM1988T formed a distinct phylogenetic lineage along with known genera within the family Pseudoalteromonadaceae, with 16S rRNA gene sequence similarity being less than 93.3% to all known species in the family. Based on the phylogenetic, genomic, chemotaxonomic and phenotypic data, strain SM1988T was considered to represent a novel species in a novel genus in the family Pseudoalteromonadaceae, for which the name Flocculibacter collagenilyticus gen. nov., sp. nov. is proposed, with the type strain being SM1988T (= MCCC 1K04279T = KCTC 72761T). Strain SM1988T showed a high production (236 U/mL) of extracellular collagenases, which had high activity against both bovine collagen and codfish collagen. Biochemical tests combined with genomic and secretomic analyses indicated that the collagenases secreted by strain SM1988T are serine proteases from the S8 family. These data suggest that strain SM1988T acts as an important player in marine collagen degradation and recycling and may have a promising potential in collagen resource utilization.

2021-01-14 | PXD023431 | Pride

Altericroceibacterium spongiae strain:HN-Y73

Project description:Altererythrobacter sp. HN-Y73 genome sequencing

| PRJNA490332 | ENA

Marinobacter sp. R17

Project description:Marinobacter sp. R17 Genome sequencing and assembly

| PRJNA498632 | ENA

Altererythrobacter sp. N1 strain:N1

Project description:Altererythrobacter sp. N1 strain:N1 Genome sequencing

| PRJNA764449 | ENA

Altererythrobacter sp. ZODW24

Project description:Altererythrobacter sp. ZODW24 Genome sequencing

| PRJNA470786 | ENA

Altererythrobacter sp. NS1

Project description:Altererythrobacter sp. NS1 genome sequencing

| PRJNA491397 | ENA

Proteogenomics of Hyphomicrobium sp. MC8b strain

Project description:This project is a proteomic comparison of Hyphomicrobium sp. MC8b grown with dichloromethane or with methanol. The datasets were obtained using the annotated genome of Hyphomicrobium sp. MC8b.

2021-09-09 | PXD021817 | Pride

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