Genomics

Dataset Information

1

Whale fall metagenome


ABSTRACT: Microbial community from a microbial mat isolated from gray whale carcass in the Santa Cruz Basin

PROVIDER: PRJNA32355 | ENA |

REPOSITORIES: ENA

Dataset's files

Source:
Action DRS
AAFZ01.dat.gz Other
AAFZ01.fasta.gz Fasta.gz
AAFZ01.master.dat Other
AAFZ01.dat.gz Other
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Publications


The species complexity of microbial communities and challenges in culturing representative isolates make it difficult to obtain assembled genomes. Here we characterize and compare the metabolic capabilities of terrestrial and marine microbial communities using largely unassembled sequence data obtained by shotgun sequencing DNA isolated from the various environments. Quantitative gene content analysis reveals habitat-specific fingerprints that reflect known characteristics of the sampled environ  ...[more]

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