Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Clostridium perfringens strain:13/0815-C

ABSTRACT: Clostridium perfringens strain:13/0815-C Genome sequencing and assembly

PROVIDER: PRJNA327302 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

C. perfringens 13 strain vs 13∆cpe1786 erm strain

Project description:Transcriptional profiling of C. perfringens 13 strain compared with strain 13∆cpe1786 erm after growth in minimal medium with 0.5 mM cystine.

2010-10-01 | GSE19359 | GEO

C. perfringens 13 strain vs 13?cpe1786 erm strain

Project description:Transcriptional profiling of C. perfringens 13 strain compared with strain 13?cpe1786 erm after growth in minimal medium with 0.5 mM cystine. two-condition experiment, 13 vs 13?cpe1786 erm, 4 biological replicates for each condition

2010-10-01 | E-GEOD-19359 | biostudies-arrayexpress

Transcritptome of a revR deletion mutant during Clostridium perfringens exponential phase growth.

2011-01-17 | GSE26508 | GEO

Transcritptome of a revR deletion mutant during Clostridium perfringens exponential phase growth.

Project description:RevR is a putative orphan response regulator with a high degree of similarity to YycF from Bacilus subtilis and PhoB from Clostridium kluyveri. A revR deletion mutant of C. perfringens strain 13 was generated and the transcriptome analysed using microarrays. Total RNA was isolated from exponentially growing cells from the revR mutant and the wild-type control. Gene expression levels were compared between the revR mutant and wild-type strain 13

2011-01-17 | E-GEOD-26508 | biostudies-arrayexpress

C. perfringens 13 strain: growth with 1 mM homocysteine vs growth with 0.5 mM cystine

Project description:Transcriptionnal profiling of C. perfringens 13 strain comparing growth in minimal medium with 1 mM homocysteine with growth in minimal medium with 0.5 mM cystine.

2010-06-01 | GSE19358 | GEO

Clostridium perfringens isolate:2020/10/13

Project description:Clostridium perfringens isolate:2020/10/13 Genome sequencing and assembly

| PRJNA814835 | ENA

The transcriptional profile of deoxycholate-induced sporulation in Clostridium perfringens food poisoning isolate

Project description:Clostridium perfringens type A is a common source of food poisoning in humans. Vegetative cells sporulate in the small intestinal tract and produce a major pathogenic factor, C. perfringens enterotoxin (CPE) during sporulation. Although sporulation plays a critical role in the pathogenesis of food poisoning, the mechanisms to induce in vivo sporulation remain unclear. Bile salts had been identified to mediate sporulation, and we have confirmed deoxycholate (DCA)-induced sporulation in C. perfringens strain NCTC8239 co-cultured with human intestinal epithelial Caco-2 cells. In this study, we performed global transcriptome analysis of strain NCTC8239 to elucidate the mechanism to induce sporulation by DCA.

2016-03-13 | GSE69649 | GEO

Clostridium perfringens

Project description:Clostridium perfringens Assembly

| PRJNA782383 | ENA

Transcritptome of a reeS deletion mutant of Clostridium perfringens during exponential phase growth.

Project description:ReeS, previously named as CPE1512, was originally annotated as the only hybrid sensor histidine kinase/response regulator in Clostridium perfringens. Further evidence suggests that ReeS is more likely to function as an orphan sensor histidine kinase. A reeS deletion mutant was constructed and the transcriptome analysed using microarrays. Total RNA was isolated from the reeS mutant and the wild-type control cells during exponential phase growth. Gene expression levels were compared between the reeS mutant and wild-type strain 13

2013-08-31 | E-GEOD-36786 | biostudies-arrayexpress

Clostridium perfringens

Project description:Clostridium perfringens Genome sequencing and assembly

| PRJNA506584 | ENA