Project description:To investigate the effect of Burkholderia fungorum (BF) on cholangiocarcinoma cells, we treated the cell lines with bacterial supernatant and performed transcriptome sequencing. By transcriptome sequencing, we quantified the differentially expressed genes in control and experimental groups. The results of GO and KEGG functional enrichment analysis showed that the differentially expressed genes were mainly involved in some biological processes of metabolism and amino acid synthesis. We inferred that the transcriptome characterization can help us understand the relationship between bacterium and tumor cell metabolism.

2022-12-31 | GSE182319 | GEO

Paraburkholderia fungorum strain:FM-2

Project description:Paraburkholderia fungorum strain:FM-2 Genome sequencing and assembly

| PRJNA738348 | ENA

Paraburkholderia fungorum strain:ES3-20

Project description:Paraburkholderia fungorum strain:ES3-20 Genome sequencing and assembly

| PRJNA331005 | ENA

Paraburkholderia fungorum strain:ATCC BAA-463

Project description:Paraburkholderia fungorum strain:ATCC BAA-463 Genome sequencing

| PRJNA265859 | ENA

Paraburkholderia fungorum strain:SEMIA 4013 | isolate:SEMIA 4013

Project description:Paraburkholderia fungorum SEMIA 4013 genome sequencing