Project description:Selective breeding of domestic dogs has generated diverse breeds often optimized for performing specialized tasks. Despite the heritability of breed-typical behavioral traits, identification of causal loci has proven challenging due to the complexity of canine population structure. We overcome longstanding difficulties in identifying genetic drivers of canine behavior by developing an innovative framework for understanding relationships between breeds and the behaviors that define them utilizing genetic data for over 4,000 domestic, semi-feral and wild canids and behavioral survey data for over 46,000 dogs. We identify ten major canine genetic lineages and their behavioral correlates and show that breed diversification is predominantly driven by non-coding regulatory variation. We determine that lineage-associated genes converge in neurodevelopmental co-expression networks, identifying a sheepdog-associated enrichment for interrelated axon guidance functions. This work presents a scaffold for canine diversification that positions the domestic dog as an unparalleled system for revealing the genetic origins of behavioral diversity.

2022-12-07 | GSE213053 | GEO

Gallus gallus breed:HuaiXiang Domestic Chickens

Project description:Gallus gallus breed:HuaiXiang Domestic Chickens Raw sequence reads

| PRJNA481097 | ENA

Gallus gallus breed:Kirin Domestic Chickens

Project description:Gallus gallus breed:Kirin Domestic Chickens Raw sequence reads

| PRJNA481134 | ENA

Meleagris gallopavo strain:domestic

Project description:Meleagris gallopavo Transcriptome expression in multiple tissues at 0, 7, 14, 21 and 28 days for both sexes

| PRJNA259229 | ENA

Meleagris gallopavo

Project description:Meleagris gallopavo