Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bradyrhizobium japonicum strain:UBMA197

ABSTRACT: Bradyrhizobium japonicum strain UBMA197 Genome sequencing and assembly

PROVIDER: PRJNA355579 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Comparison of Bradyrhizobium japonicum parent strain LO with irr mutant strain LODTM5

Project description:The purpose of the study is to identify Irr-responsive genes in the bacterium Bradyrhizobium japonicum. Parent strain LO was compared to irr mutant strain LODTM5 by whole genome microarray analysis. Both cell types were grown in iron-limited media. Keywords: Comparison of B. japonicum wild type and mutant cells

2006-03-15 | GSE4155 | GEO

Comparison of Bradyrhizobium japonicum parent strain LO grown under low or high iron conditions

Project description:The purpose of the study is to identify iron-responsive genes in the bacterium Bradyrhizobium japonicum. Parent strain LO was grown under iron limitation or under iron sufficiency and compared to each other by whole genome microarray analysis. Keywords: Comparison of cells grown under low or high iron conditons

2006-03-15 | GSE4143 | GEO

Bradyrhizobium japonicum

Project description:Bradyrhizobium japonicum Genome sequencing and assembly

| PRJNA347501 | ENA

Bradyrhizobium japonicum strain:5873

Project description:Bradyrhizobium japonicum strain:5873 Genome sequencing and assembly

| PRJNA599076 | ENA

Bradyrhizobium japonicum strain:TXVA

Project description:Bradyrhizobium japonicum strain:TXVA Genome sequencing and assembly

| PRJNA805881 | ENA

Bradyrhizobium japonicum strain:FN1

Project description:Bradyrhizobium japonicum strain:FN1 Genome sequencing and assembly

| PRJNA239701 | ENA

Bradyrhizobium japonicum strain:UBMA194

Project description:Bradyrhizobium japonicum strain UBMA194 Genome sequencing and assembly

| PRJNA355576 | ENA

Bradyrhizobium japonicum strain:TXEA

Project description:Bradyrhizobium japonicum strain:TXEA Genome sequencing and assembly

| PRJNA805953 | ENA

Bradyrhizobium japonicum strain:E109

Project description:Bradyrhizobium japonicum strain:E109 Genome sequencing

| PRJNA270102 | ENA

Characterization of the Bradyrhizobium japonicum NtrC regulon by DNA Microarray analysis.

Project description:The Bradyrhizobium japonicum NtrC regulatory protein influences gene expression in response to changes in intracellular nitrogen status. Under conditions of low nitrogen, phosphorylation of NtrC results in up-regulation of a number of genes involved in nitrogen metabolism and nitrogen acquisition. To better define the exact nature of NtrC’s influence on gene expression, a ntrC mutation was created in B. japonicum and transcriptional profiling was performed by DNA microarray analysis of both the mutant and wild type strains. Bradyrhizobium japonicum USDA 110 and a ntrC mutant in the USDA 110 background were cultured in minimal medium supplemented with either 10mM glutamate (low nitrogen) or 10mM ammonium and 10mM glutamate (high nitrogen) as nitrogen sources. Four comparisons were performed: wild type high nitrogen vs. mutant high nitrogen, wild type low nitrogen vs. wild type high nitrogen, wild type low nitrogen vs. mutant low nitrogen, and mutant low nitrogen vs. mutant high nitrogen. For each of the four comparisons, three biological replicates were prepared for each strain and dye swap replications were performed for each hybridization producing a total of six arrays per comparison and 24 arrays in total.

2015-06-25 | E-GEOD-66091 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data