Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Populus trichocarpa cultivar:BESC 191

ABSTRACT: Populus trichocarpa BESC 191 transcriptome - BESC 191- young leaf

PROVIDER: PRJNA408776 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Populus trichocarpa strain:Besc-191

Project description:Populus trichocarpa strain:Besc-191 Genome sequencing

| PRJNA249313 | ENA

Ozone exposure of Populus deltoides and Populus trichocarpa

Project description:Populus deltoides and Populus trichocarpa were exposed to either ambient air or an acute ozone exposure of 200 ppb for 9 hrs and ozone response was profiled for each genotype by hybridising control against ozone-exposed samples per genotype. Keywords: stress response, genotype comparrison, ozone exposure RNA was extracted from the fifth leaf below the first fully unfurled leaf for each plant. Control and ozone-exposed plants were then randomly paired for hybridisation.

2009-04-01 | E-GEOD-10874 | biostudies-arrayexpress

Ozone exposure of Populus deltoides and Populus trichocarpa

2009-04-01 | GSE10874 | GEO

Populus trichocarpa cultivar:BESC 315

Project description:Populus trichocarpa BESC 315 transcriptome - BESC 315- young leaf

| PRJNA408778 | ENA

Populus trichocarpa cultivar:BESC 85

Project description:Populus trichocarpa BESC 85 transcriptome - BESC 85- young leaf

| PRJNA408779 | ENA

Populus trichocarpa cultivar:BESC 20

Project description:Populus trichocarpa BESC 20 transcriptome - BESC 20- young leaf

| PRJNA408777 | ENA

Populus trichocarpa cultivar:BESC 91

Project description:Populus trichocarpa BESC 91 transcriptome - BESC 91 - young leaf

| PRJNA408780 | ENA

Transcriptome analyses of the Laccaria bicolor-Populus trichocarpa mycorrhiza

Project description:Illumina HiSeq2000 technology was used to generate mRNA profiles from the ectomycorrhizal fungi Laccaria bicolor colonizing roots of Populus trichocarpa. Samples were taken after 3 months of contact in order to identify mycorrhiza-regulated transcripts. 100bp reads were generated and aligned to the Populus trichocarpa (http://www.phytozome.net/poplar.php) reference genome.

2017-04-03 | GSE75437 | GEO

Screen of oligonucleotides for microarray transcriptome analysis of Populus deltoides and P. trichocarpa

Project description:The purpose of this study was to evaluate a set of 6-7 long oligonucleotide probes developed based on the sequence of the Populus trichocarpa genome, that are optimal for gene expression analysis of P. deltoides and a hybrid of P. deltoides and P. trichocarpa. To evaluate these probes, multiple tissues (differentiating xyle, leaf and whole-root) of a pure P. deltoides and a hybrid (P. deltoides X P. trichocarpa) were transcript profiled for identification of one or more probes that are not biased towards one or the other genotype.

2008-09-10 | GSE12492 | GEO

RNAseq of bending treated Populus trichocarpa

Project description:We treated 6 month Populus trichocarpa by bending for 0, 3, and 7 days to see effects of bending treatment on wood formation at transcript level

2020-07-05 | GSE153793 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data