Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Neokomagataea tanensis strain:AH13(T) = NBRC 106556(T)

ABSTRACT: Neokomagataea tanensis strain:AH13(T) = NBRC 106556(T) Genome sequencing

PROVIDER: PRJNA492196 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Neokomagataea thailandica NBRC 106555

Project description:Neokomagataea thailandica NBRC 106555 genome sequencing project

| PRJDB445 | ENA

Neokomagataea tanensis NBRC 106556

Project description:Neokomagataea tanensis NBRC 106556 genome sequencing project

| PRJDB444 | ENA

Expression analysis of Gluconacetobacter xylinus NBRC 3288 delta-fnrG mutant

Project description:Investigation of whole genome gene expression level changes in a Gluconacetobacter xylinus NBRC 3288 delta-fnrG mutant, compared to the wild-type strain.

2021-07-16 | GSE41775 | GEO

Neokomagataea

Project description:Neokomagataea sp. overview

| PRJNA722346 | ENA

Neokomagataea sp.

Project description:Neokomagataea sp. Genome sequencing and assembly

| PRJNA528182 | ENA

Neokomagataea thailandica

Project description:Neokomagataea thailandica overview

| PRJNA173299 | ENA

Neokomagataea tanensis

Project description:Neokomagataea tanensis overview

| PRJNA173298 | ENA

Neokomagataea sp. TBRC 2177

Project description:Neokomagataea sp. TBRC 2177 Genome sequencing and assembly

| PRJNA721812 | ENA

Transcriptome analysis of Bacillus subtilis NBRC 16449 grown on surface of boiled soybeans under the similar condition to production of Japanese traditional soybean-fermented food "natto"

Project description:Purpose:The goals of this study are to clarify the B. subtilis NBRC 16449 response to soybeans. Methods: B. subtilis NBRC 16449 cells were aerobically cultured in liquid LB, LB solidified with agar, or on surface of boiled soybeans to logarithmic growth phase. Total RNAs were extracted from bacterial cells by Hot-Phenol method. Samples for RNA-seq were prepared according to Illmina protocol available from the manufacture. The sequence reads that passed quality filters were analyzed at the transcript isoform level with bowtie v0.11.2. Results: Using an optimized data analysis workflow, we mapped around 15 million sequence reads per sample to the whole genome of B. subtilis BEST195 and identified 4271 transcripts in B. subtilis NBRC 16449 with Bowtie aligner. Read count per genome was extracted from known gene annotations with HTSeq program. Compared the transcriptomes of B. subtilis NBRC 16449 grown on LB solidified with agar to that grown on surface of boiled soybeans, about 5% of genes showed the different expression levels.

2020-11-02 | GSE109523 | GEO

Modestobacter roseus strain:NBRC 108673

Project description:Modestobacter roseus strain:NBRC 108673 Genome sequencing

| PRJNA630949 | ENA