Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Acidithiobacillus ferrooxidans isolate:RVS1

ABSTRACT: Acidithiobacillus ferrooxidans isolate:RVS1 Genome sequencing and assembly

PROVIDER: PRJNA499028 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Acidithiobacillus ferrooxidans

Project description:Acidithiobacillus ferrooxidans Genome sequencing

| PRJNA758158 | ENA

Global Transcriptional Analysis of Stress-Response Strategies in Acidithiobacillus ferrooxidans ATCC 23270 Exposed to Organic Extractant - Lix984n

Project description:Acidithiobacillus ferrooxidans (A. ferrooxidans) ATCC 23270 is a model bacteria for bioleaching research. Because of the use of extractant in metal extraction industry, A. ferrooxidans needs to cope with the water-organic two-phase system. To get insight into the molecular response of A. ferrooxidans to organic solvent, global gene expression pattern was examined in A. ferrooxidans ATCC 23270 cells subjected to Lix984n (an organic extractant) using the method of whole-genome DNA microarray. The data suggested that the global response of A. ferrooxidans to Lix984n stress was characterized by the up-regulation of genes involved in pentose phosphate pathway, fatty acid and glutamate biosynthesis contrary to the significant down-regulation of the majority motility-related genes. In further study, compared to heterotrophic bacteria in dealing with short-time stress, A. ferrooxidans has a special strategy of continuously enhancing the expression of genes encoding proteins involved in electron transport, such as petI, petII, cyo and cyd. Besides, acrAB-tolC operon encoding organic solvent efflux pump and its positive regulator gene ostR were addressed.

2011-04-14 | GSE28538 | GEO

Acidithiobacillus ferrooxidans strain:water | isolate:water

Project description:Acidithiobacillus ferrooxidans strain:water | isolate:water Genome sequencing

| PRJNA766325 | ENA

Acidithiobacillus ferrooxidans strain:BY0502

Project description:Acidithiobacillus ferrooxidans Genome sequencing and assembly

| PRJNA317193 | ENA

Acidithiobacillus ferrooxidans strain:Hel18

Project description:Acidithiobacillus ferrooxidans genome sequencing and assembly

| PRJNA308169 | ENA

Acidithiobacillus ferrooxidans strain:Wenelen

Project description:Acidithiobacillus ferrooxidans Wenelen Genome sequencing and assembly

| PRJNA339311 | ENA

Global Transcriptional Analysis of Stress-Response Strategies in Acidithiobacillus ferrooxidans ATCC 23270 Exposed to Organic Extractant - Lix984n

2011-04-14 | E-GEOD-28538 | biostudies-arrayexpress

Acidithiobacillus ferrooxidans strain:COP1

Project description:Acidithiobacillus ferrooxidans strain:COP1 Genome sequencing and assembly

| PRJNA623639 | ENA

Acidithiobacillus ferrooxidans strain:S10

Project description:Acidithiobacillus ferrooxidans strain:S10 Genome sequencing and assembly

| PRJNA623644 | ENA

Acidithiobacillus ferrooxidans strain:F221

Project description:Acidithiobacillus ferrooxidans strain:F221 Genome sequencing and assembly

| PRJNA623647 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data