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Next Generation Sequencing Facilitates Quantitative Analysis of root of original buckwheat (Fagopyrum hailuogouense) Transcriptomes

ABSTRACT: Next Generation Sequencing Facilitates Quantitative Analysis of root of original buckwheat (Fagopyrum hailuogouense) Transcriptomes

PROVIDER: PRJNA508529 | ENA |

REPOSITORIES: ENA

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Next Generation Sequencing Facilitates Quantitative Analysis of root of original buckwheat (Fagopyrum hailuogouense) Transcriptomes

Project description:We generated 48.39 Gb of high-quality sequencing data (~8.07 Gb per sample). The analysis showed differences of transcriptomes between dormancy and growth stages of origina buckwheat roots. We identified numerous differentially expressed genes that exhibited distinct expression patterns. These genes have known or potential roles in development of origina buckwheat roots. Therefore, we are appealing candidates for further investigation of the gene expression and associated regulatory mechanisms related to asexual reproduction character.

2018-12-13 | GSE123374 | GEO

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Next Generation Sequencing Facilitates Quantitative Analysis of seed development of Tartary buckwheat Transcriptomes

Project description:We generated 76.61 Gb of high-quality sequencing data (~8.51 Gb per sample) and catalogued the expression profiles of 9,765 annotated Tartary buckwheat genes in each sample. The analysis showed differences of transcriptomes during the development of buckwheat seed. We identified numerous differentially expressed genes that exhibited distinct expression patterns. These genes have known or potential roles in development of buckwheat seed. Therefore, they are appealing candidates for further investigation of the gene expression and associated regulatory mechanisms related to development.

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Transcriptome analysis of buckwheat seed developmental

Project description:Combining the Solexa/ Illumina RNA-seq high-throughput sequencing approach with Digital Gene Expression (DGE) analysis results in a powerful transcriptomic study. This publication reports the transcriptome profiling analysis of Fagopyrum esculentum Moench. using RNA-seq and DGE in order to better understand the molecular mechanisms underlying biological aspects of buckwheat, especially seed development and maturation.

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Project description:Next Generation Sequencing Facilitates Quantitative Analysis of seed development of Tartary buckwheat Transcriptomes

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Next Generation Sequencing Facilitates Quantitative Analysis of Original and RCHO-resistant OCI-LY8 cell Transcriptomes

Project description:The goal of this study is to screen the differential genes between original and RCHO-resistant OCI-LY8 cells, then analyze the significant pathways.

2020-03-30 | GSE112989 | GEO

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