Genomics

Dataset Information

0

Ophiognomonia clavigignenti-juglandacearum


ABSTRACT: Genome sequencing of pooled DNA from eight isolates

ORGANISM(S): Ophiognomonia clavigignenti-juglandacearum  

PROVIDER: PRJNA52061 | ENA |

REPOSITORIES: ENA

Dataset's files

Source:
Action DRS
AEGN01.dat.gz Other
AEGN01.fasta.gz Fasta.gz
AEGN01.master.dat Other
SRR065128.fastq.gz Fastqsanger.gz
AEGN01.dat.gz Other
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Publications

Discovery of single-nucleotide polymorphisms (SNPs) in the uncharacterized genome of the ascomycete Ophiognomonia clavigignenti-juglandacearum from 454 sequence data.

Broders K D KD   Woeste K E KE   San Miguel P J PJ   Westerman R P RP   Boland G J GJ  

Molecular ecology resources 20110302 4


The benefits from recent improvement in sequencing technologies, such as the Roche GS FLX (454) pyrosequencing, may be even more valuable in non-model organisms, such as many plant pathogenic fungi of economic importance. One application of this new sequencing technology is the rapid generation of genomic information to identify putative single-nucleotide polymorphisms (SNPs) to be used for population genetic, evolutionary, and phylogeographic studies on non-model organisms. The focus of this re  ...[more]

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