Project description:Transcriptional profiling of A. oleivorans DR1 cells comparing wild type stationary phase cells with aqsR mutant stationary phase cells.

2013-02-16 | GSE44347 | GEO

Polymorphisms in RocA contribute to the molecular pathogenesis of serotype M28 group A streptococcus

Project description:RNA-seq experiments of serotype M28 group A streptococcus strains with mutations in rocA at two time points

2019-06-25 | GSE133203 | GEO

Stationary phase stimulon and CspC regulon

Project description:The cold shock proteins belong to a family of RNA binding proteins presenting a highly conserved domain, called cold shock domain (CSD). They are involved in various cellular processes, including adaptation to low temperature, nutritional stress, cell growth and stationary phase. Here we investigate the role of CspC in C. crescentus stationary phase and the molecular mechanisms underlying gene regulation by this protein. A global transcriptional profiling experiment comparing cspC and the wild type strain both at exponential and stationary phases was carried out. The results showed that the absence of cspC affected the transcription of 20 genes at exponential phase and 65 genes at stationary phase. Genes encoding enzymes of the glyoxylate cycle were severely downregulated in the mutant at stationary phase. The stationary phase-induced RNA binding protein CspC has an important role in gene expression at this phase. It is required for the expression of the essential gene sciP, the ECF sigma factor sigU, as well as of the genes for the glyoxylate cycle enzymes and for oxidative stress response.

2015-08-24 | GSE61726 | GEO

Xbp1 binding during log phase and stationary phase.

Project description:To determine where Xbp1 binds to chromatin during log phase and stationary phase, we performed ChIP-seq.

2022-08-17 | GSE210933 | GEO

RocA has serotype-specific gene regulatory and pathogenesis activity in serotype M28 group A streptococcus

Project description:RNA-seq experiments of a wild-type and isogenic rocA deletion mutant serotype M28 group A streptococcus strain at two time points

2018-08-27 | GSE118609 | GEO

Acinetobacter oleivorans DR1 : WT stationary phase vs. aqsR mutant stationary phase

Project description:Transcriptional profiling of A. oleivorans DR1 cells comparing wild type stationary phase cells with aqsR mutant stationary phase cells. To identify genes regulated QS system in A. oleivorans DR1, the cells were grown to stationary phase (OD600 >0=2.0).

2013-02-16 | E-GEOD-44347 | biostudies-arrayexpress

E. coli MG1655 pJV300 stationary phase

Project description:E. coli MG1655 pJV300 stationary phase

| PRJEB41581 | ENA