Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

16s rDNA-sequencing of gastric flora in mouse fed with high salt with or without buckwheat

ABSTRACT: 16s rDNA-sequencing of gastric flora in mouse fed with high salt with or without buckwheat

PROVIDER: PRJNA547992 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

16s rDNA-sequencing of gastric flora in mouse fed with high salt with or without buckwheat

Project description:Divided into four groups,CTL,Salt,(S+B),B.CTL group was fed with normal salt diets for 4 weeks,Salt group were fed with high salt diets(5% NaCl)for 4 weeks,(S+B)group were fed with high salt diets mixed with buckwheat (1:1)for 4 weeks ,B group: first fed high salt diets for 4 weeks and then fed with buckwheat for 4 weeks. Extract mouse gastric flora DNA and sequence.

2019-06-10 | GSE132412 | GEO

16s rDNA-sequencing of gastric flora in mice fed with high-salt diets

Project description:There are 10 mice in the experiment, named REC. The mice were fed with high salt diets (5% NaCl) for 4 weeks and then fed with normal salt diets for 4 weeks. Then extracted DNA from mice gastric flora to detect changes in the gastric flora of mice.

2019-07-13 | GSE134237 | GEO

16s rDNA-sequencing of gastric flora in mice fed with high-salt diets

Project description:16s rDNA-sequencing of gastric flora in mice fed with high-salt diets

| PRJNA554370 | ENA

Mice with and without enteric flora

Project description:Although microbiota plays a critical role for the normal development and function of host immune systems, the detail of the influence, especially on those in the large intestine (LI), remains unknown. Here, we performed transcriptome analysis using Affymetrix GeneChip on LI of germ-free (GF) and specific pathogen free (SPF) mice of IQI, an inbred strain established from ICR. Keywords: comparison of the mice with or without enteric flora

2007-06-06 | GSE8006 | GEO

soil 16s rDNA

Project description:soil 16s rDNA Metagenome

| PRJNA756830 | ENA

Next Generation Sequencing Facilitates Quantitative Analysis of Tartary buckwheat Transcriptomes

Project description:We generated 61.9 Gb of high-quality sequencing data (~6.59 Gb per sample) and catalogued the expression profiles of 9,765 annotated Tartary buckwheat genes in each sample. The analysis showed differences of transcriptomes during the development of buckwheat. We identified numerous differentially expressed genes that exhibited distinct expression patterns. These genes have known or potential roles in development of buckwheat. Therefore, we are appealing candidates for further investigation of the gene expression and associated regulatory mechanisms.

2022-02-14 | GSE126576 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of seed development of Tartary buckwheat Transcriptomes

Project description:We generated 76.61 Gb of high-quality sequencing data (~8.51 Gb per sample) and catalogued the expression profiles of 9,765 annotated Tartary buckwheat genes in each sample. The analysis showed differences of transcriptomes during the development of buckwheat seed. We identified numerous differentially expressed genes that exhibited distinct expression patterns. These genes have known or potential roles in development of buckwheat seed. Therefore, they are appealing candidates for further investigation of the gene expression and associated regulatory mechanisms related to development.

2018-08-22 | GSE111937 | GEO

16S rDNA Amplicon Sequencing Analysis of Polystyrene Microplastic Exposed Zebrafish Intestine

Project description:Microplastics (MPs) as widespread contamination pose high risk for aquatic organisms.Intestinal microbiotahas have high interaction with immune system of host body. In this study, intestinal microbiota of zebrafish after Polystyrene (PS-MPs) exposure were characterized by 16S rDNA amplicon sequencing. We found that 100nm and 200μm PS-MPs exposure significantly increased diversity of intestinal microbiota and all the three sizes of PS-MPs increased abundance of pathogenic bacteria.

2019-10-01 | GSE136108 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of Seed Development of Easy Dehulling Tartary Buckwheat Transcriptomes

Project description:We generated 78.41 Gb of high-quality sequencing data (~8.71 Gb per sample) and catalogued the expression profiles of 9,765 annotated Tartary buckwheat genes in each sample. The analysis showed differences of transcriptomes during the development of easy dehulling buckwheat seed. We identified numerous differentially expressed genes that exhibited distinct expression patterns. These genes have known or potential roles in development of easy dehulling buckwheat seed. Therefore, we are appealing candidates for further investigation of the gene expression and associated regulatory mechanisms related to easy dehulling character.

2022-03-31 | GSE122540 | GEO

Transcriptome analysis of buckwheat seed developmental

Project description:Combining the Solexa/ Illumina RNA-seq high-throughput sequencing approach with Digital Gene Expression (DGE) analysis results in a powerful transcriptomic study. This publication reports the transcriptome profiling analysis of Fagopyrum esculentum Moench. using RNA-seq and DGE in order to better understand the molecular mechanisms underlying biological aspects of buckwheat, especially seed development and maturation.

2017-12-31 | GSE34314 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data